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    LOC446082 alpha-2,8-sialyltransferase 8F [ Takifugu rubripes (torafugu) ]

    Gene ID: 446082, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC446082
    Gene description
    alpha-2,8-sialyltransferase 8F
    See related
    Ensembl:ENSTRUG00000016460
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Also known as
    siat 8Fr
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 5 NC_042289.1 (11997853..12001144, complement)
    101 previous assembly FUGU5 (GCF_000180615.1) 5 NC_018894.1 (10414721..10418433, complement)

    Chromosome 5 - NC_042289.1Genomic Context describing neighboring genes Neighboring gene alpha-2,8-sialyltransferase 8E-like Neighboring gene alpha-2,8-sialyltransferase 8F-like Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene ribosomal protein L19 Neighboring gene calcium channel, voltage-dependent, beta 1 subunit Neighboring gene transfer RNA cysteine (anticodon GCA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The animal sialyltransferases and sialyltransferase-related genes: a phylogenetic approach. Harduin-Lepers A, et al. Glycobiology, 2005 Aug. PMID 15843597

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-glycan processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oligosaccharide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-2,8-sialyltransferase 8F
    Names
    alpha-2,8-sialyltransferase ST8Sia VIr
    st8Sia VI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042289.1 Reference fTakRub1.2 Primary Assembly

      Range
      11997853..12001144 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003964815.3 → XP_003964864.2  alpha-2,8-sialyltransferase 8F

      UniProtKB/TrEMBL
      A0A674MZN4, Q6KBZ8
      Related
      ENSTRUP00000066876.1, ENSTRUT00000062394.1
      Conserved Domains (1) summary
      pfam00777
      Location:94 → 349
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
    Nucleotide Protein
    Heading Accession and Version

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