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Links from Protein

    • Showing Current items.

    sre-33 Serpentine receptor class epsilon-33 [ Caenorhabditis elegans ]

    Gene ID: 189226, updated on 20-Oct-2023

    Summary

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    Gene symbol
    sre-33
    Gene description
    Serpentine receptor class epsilon-33
    Primary source
    WormBase:WBGene00012287
    Locus tag
    CELE_W05H5.6
    See related
    AllianceGenome:WB:WBGene00012287
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (12453302..12454693)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene Serpentine receptor class epsilon-32 Neighboring gene Serpentine receptor class epsilon-38

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine receptor class epsilon-33
    NP_496649.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12453302..12454693
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064248.3 → NP_496649.2  Serpentine receptor class epsilon-33 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496649.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O18175
      Conserved Domains (1) summary
      pfam03125
      Location:1 → 359
      Sre; C. elegans Sre G protein-coupled chemoreceptor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O18175.2

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