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    RpS3A ribosomal protein S3A [ Bombyx mori (domestic silkworm) ]

    Gene ID: 692713, updated on 23-May-2024

    Summary

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    Gene symbol
    RpS3A
    Gene description
    ribosomal protein S3A
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bombyx mori
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
    Also known as
    RpS3Ae
    Orthologs
    fruit fly all
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    Genomic context

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    See RpS3A in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 23 NC_085129.1 (19705493..19713400)
    103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 23 NC_051380.1 (19689502..19694895)

    Chromosome 23 - NC_085129.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101743896 Neighboring gene uncharacterized LOC101743652 Neighboring gene delta4-sphingolipid-FADS-like protein ifc Neighboring gene lysosome membrane protein 2 Neighboring gene anoctamin-4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
    2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small ribosomal subunit protein eS1
    Names
    ribosomal protein S3Ae
    NP_001037255.1
    XP_062531107.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001043790.1 → NP_001037255.1  small ribosomal subunit protein eS1

      See identical proteins and their annotated locations for NP_001037255.1

      Status: PROVISIONAL

      Source sequence(s)
      AY769317
      UniProtKB/Swiss-Prot
      Q64FN2
      Conserved Domains (1) summary
      pfam01015
      Location:21 → 224
      Ribosomal_S3Ae; Ribosomal S3Ae family

    RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3026992v2 Primary Assembly

    Genomic

    1. NC_085129.1 Reference ASM3026992v2 Primary Assembly

      Range
      19705493..19713400
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_062675123.1 → XP_062531107.1  small ribosomal subunit protein eS1 isoform X1

      UniProtKB/Swiss-Prot
      Q64FN2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q64FN2.1 GenPept UniProtKB/Swiss-Prot:Q64FN2

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases