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    CNAG_07552 DNA repair protein Rad8 [ Cryptococcus neoformans var. grubii H99 ]

    Gene ID: 23890389, updated on 17-May-2024

    Summary

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    Gene symbol
    CNAG_07552
    Gene description
    DNA repair protein Rad8
    Primary source
    FungiDB:CNAG_07552
    Locus tag
    CNAG_07552
    See related
    VEuPathDB:CNAG_07552
    Gene type
    protein coding
    RNA name
    DNA repair protein Rad8
    RefSeq status
    PROVISIONAL
    Organism
    Cryptococcus neoformans var. grubii H99 (strain: H99)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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    Genomic context

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    See CNAG_07552 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Sequence:
    Chromosome: 3; NC_026747.1 (1179032..1187083)

    Chromosome 3 - NC_026747.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene polycomb protein e(z) Neighboring gene capsular associated protein Neighboring gene tip120-family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_026747.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation. Janbon G, et al. PLoS Genet, 2014 Apr. PMID 24743168, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    polyA_site

    • Loc: 1187073-1187073

    General protein information

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    Preferred Names
    DNA repair protein Rad8

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_026747.1 Reference assembly

      Range
      1179032..1187083
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012192574.1 → XP_012047964.1  DNA repair protein Rad8 [Cryptococcus neoformans var. grubii H99]

      See identical proteins and their annotated locations for XP_012047964.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      J9VI03
      UniProtKB/TrEMBL
      A0A854QE75
      Conserved Domains (5) summary
      COG0270
      Location:375 → 611
      Dcm; Site-specific DNA-cytosine methylase [Replication, recombination and repair]
      COG0553
      Location:2166 → 2296
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      pfam00385
      Location:62 → 117
      Chromo; Chromo (CHRromatin Organisation MOdifier) domain
      pfam14634
      Location:2081 → 2117
      zf-RING_5; zinc-RING finger domain
      cl26465
      Location:1457 → 1549
      SNF2_N; SNF2 family N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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