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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Homo sapiens			VCF
GSE245771	Differential DNA methylation occurs in RUNX1 heterozygous mutations harboring hematopoietic progenitor cells	Methylation profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Homo sapiens	13		TXT VCF	Yuki Tanaka	Feb 26, 2024
GSE242475	DNA methylome, R-loop and clinical exome profiling of patients with sporadic Amyotrophic Lateral Sclerosis	Methylation profiling by high throughput sequencing Other	Homo sapiens	28		BW TXT VCF	Lorant Szekvolgyi	Dec 31, 2023
GSE229315	Clinical relevance of BRCA1 promoter methylation testing in ovarian cancer patients.	Methylation profiling by high throughput sequencing	Homo sapiens	100		VCF	Felix Blanc-Durand	Apr 10, 2023
GSE208549	Accurate simultaneous sequencing of genetic and epigenetic bases in DNA	Methylation profiling by high throughput sequencing Other	Homo sapiens	7		BEDGRAPH CSV TSV VCF	Páidí Creed	Jul 24, 2022
GSE178206	Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism.	Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	195		TXT VCF	Janine LaSalle	Jan 13, 2022
GSE158011	DNA methylation maintains integrity of higher order genome architecture	Other Methylation profiling by high throughput sequencing	Homo sapiens	46		BW VCF	Qian Du	Sep 21, 2021
GSE152640	Structure of DNA methyltransferases DNMT3A/DNMT3B bound to a nucleosome	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens synthetic construct	36		BW IDAT VCF	Peter A Jones	Jun 17, 2020
GSE148185	Three-dimensional chromatin interactions remain stable upon CAG/CTG repeat expansion	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	275		BEDGRAPH BIGWIG TXT VCF	Gustavo Agustín Ruiz Buendía	Apr 07, 2020
GSE140270	α-Ketoglutarate attenuates Wnt signaling and drives differentiation in colorectal cancer	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by array Other	Homo sapiens Mus musculus	44		VCF	Haiqing Li	Mar 23, 2020
GSE118716	Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40		BB BW HIC TXT VCF	Joanna Achinger-Kawecka	Dec 11, 2019
GSE110538	Active BRAF-V600E is the key player in generation of a sessile serrated polyp-specific DNA methylation profile	Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	28		VCF	David A Jones	Apr 09, 2018
GSE79148	Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation: Methyl-seq data for the identification of hap-ASM	Methylation profiling by high throughput sequencing	Homo sapiens	13		BEDGRAPH VCF SRA Run Selector	Benjamin Tycko	Mar 21, 2016
GSE79262	Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation	Methylation profiling by genome tiling array Genome variation profiling by SNP array Methylation profiling by high throughput sequencing	Homo sapiens	326		BEDGRAPH IDAT VCF	Benjamin Tycko	Mar 21, 2016