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Status
Public on Mar 19, 2004
Title
GNF1M
Technology type
in situ oligonucleotide
Distribution
non-commercial
Organism
Mus musculus
Description
GNF1M
Submission date
Mar 18, 2004
Last update date
Jun 16, 2005
Contact name
John R Walker
E-mail(s)
jwalker@gnf.org Phone
858-812-1636
Organization name
Genomics Institute of the Novartis Research Foundation
Lab
Genetics Core
Street address
10675 John Jay Hopkins
City
San Diego
State/province
CA
ZIP/Postal code
92121
Country
USA
Samples (310)
GSM18584 , GSM18585 , GSM18586 , GSM18587 , GSM18588 , GSM18589
GSM18590 ,
GSM18591 ,
GSM18592 ,
GSM18593 ,
GSM18594 ,
GSM18595 ,
GSM18596 ,
GSM18597 ,
GSM18598 ,
GSM18599 ,
GSM18600 ,
GSM18601 ,
GSM18602 ,
GSM18603 ,
GSM18604 ,
GSM18605 ,
GSM18606 ,
GSM18607 ,
GSM18608 ,
GSM18609 ,
GSM18610 ,
GSM18611 ,
GSM18612 ,
GSM18613 ,
GSM18614 ,
GSM18615 ,
GSM18616 ,
GSM18617 ,
GSM18618 ,
GSM18619 ,
GSM18620 ,
GSM18621 ,
GSM18622 ,
GSM18623 ,
GSM18624 ,
GSM18625 ,
GSM18626 ,
GSM18627 ,
GSM18628 ,
GSM18629 ,
GSM18630 ,
GSM18631 ,
GSM18632 ,
GSM18633 ,
GSM18634 ,
GSM18635 ,
GSM18636 ,
GSM18637 ,
GSM18638 ,
GSM18639 ,
GSM18640 ,
GSM18641 ,
GSM18642 ,
GSM18643 ,
GSM18644 ,
GSM18645 ,
GSM18646 ,
GSM18647 ,
GSM18648 ,
GSM18649 ,
GSM18650 ,
GSM18651 ,
GSM18652 ,
GSM18653 ,
GSM18654 ,
GSM18655 ,
GSM18656 ,
GSM18657 ,
GSM18658 ,
GSM18659 ,
GSM18660 ,
GSM18661 ,
GSM18662 ,
GSM18663 ,
GSM18664 ,
GSM18665 ,
GSM18666 ,
GSM18667 ,
GSM18668 ,
GSM18669 ,
GSM18670 ,
GSM18671 ,
GSM18672 ,
GSM18673 ,
GSM18674 ,
GSM18675 ,
GSM18676 ,
GSM18677 ,
GSM18678 ,
GSM18679 ,
GSM18680 ,
GSM18681 ,
GSM18682 ,
GSM18683 ,
GSM18684 ,
GSM18685 ,
GSM18686 ,
GSM18687 ,
GSM18688 ,
GSM18689 ,
GSM18690 ,
GSM18691 ,
GSM18692 ,
GSM18693 ,
GSM18694 ,
GSM18695 ,
GSM18696 ,
GSM18697 ,
GSM18698 ,
GSM18699 ,
GSM18700 ,
GSM18701 ,
GSM18702 ,
GSM18703 ,
GSM18704 ,
GSM18705 ,
GSM86176 ,
GSM86177 ,
GSM86178 ,
GSM86179 ,
GSM86180 ,
GSM86181 ,
GSM86182 ,
GSM86183 ,
GSM86184 ,
GSM86185 ,
GSM86186 ,
GSM86187 ,
GSM86188 ,
GSM86189 ,
GSM86190 ,
GSM86191 ,
GSM86192 ,
GSM86193 ,
GSM86194 ,
GSM86195 ,
GSM86196 ,
GSM86197 ,
GSM86198 ,
GSM86199 ,
GSM86200 ,
GSM86201 ,
GSM86202 ,
GSM86203 ,
GSM86204 ,
GSM86205 ,
GSM86206 ,
GSM86207 ,
GSM86208 ,
GSM86209 ,
GSM86210 ,
GSM86211 ,
GSM86212 ,
GSM86213 ,
GSM86252 ,
GSM86253 ,
GSM86254 ,
GSM86255 ,
GSM86256 ,
GSM86257 ,
GSM86258 ,
GSM86259 ,
GSM86260 ,
GSM86261 ,
GSM86262 ,
GSM86263 ,
GSM86264 ,
GSM86265 ,
GSM86266 ,
GSM86267 ,
GSM86268 ,
GSM86269 ,
GSM86270 ,
GSM86271 ,
GSM86272 ,
GSM86273 ,
GSM86274 ,
GSM86275 ,
GSM86276 ,
GSM86277 ,
GSM86278 ,
GSM86279 ,
GSM86280 ,
GSM86281 ,
GSM86282 ,
GSM86283 ,
GSM86284 ,
GSM86285 ,
GSM86286 ,
GSM86287 ,
GSM86288 ,
GSM86289 ,
GSM87300 ,
GSM87301 ,
GSM87302 ,
GSM87303 ,
GSM87304 ,
GSM87305 ,
GSM138562 ,
GSM138563 ,
GSM138564 ,
GSM138565 ,
GSM138566 ,
GSM138567 ,
GSM138568 ,
GSM138569 ,
GSM138570 ,
GSM138571 ,
GSM138572 ,
GSM138573 ,
GSM138574 ,
GSM138575 ,
GSM138576 ,
GSM138577 ,
GSM138578 ,
GSM138579 ,
GSM138580 ,
GSM138581 ,
GSM138582 ,
GSM138583 ,
GSM138584 ,
GSM138585 ,
GSM184189 ,
GSM184190 ,
GSM184191 ,
GSM184192 ,
GSM184193 ,
GSM184194 ,
GSM184195 ,
GSM184196 ,
GSM184197 ,
GSM184198 ,
GSM184199 ,
GSM184200 ,
GSM184201 ,
GSM184202 ,
GSM184203 ,
GSM184204 ,
GSM184205 ,
GSM184206 ,
GSM184207 ,
GSM184208 ,
GSM184209 ,
GSM184210 ,
GSM184211 ,
GSM184212 ,
GSM184213 ,
GSM184214 ,
GSM184215 ,
GSM184216 ,
GSM184217 ,
GSM184218 ,
GSM184219 ,
GSM184220 ,
GSM184221 ,
GSM184222 ,
GSM198202 ,
GSM198203 ,
GSM198204 ,
GSM198205 ,
GSM198206 ,
GSM198207 ,
GSM198208 ,
GSM198209 ,
GSM198210 ,
GSM198211 ,
GSM198212 ,
GSM198213 ,
GSM198214 ,
GSM198215 ,
GSM198216 ,
GSM198217 ,
GSM198218 ,
GSM198219 ,
GSM198220 ,
GSM198221 ,
GSM198222 ,
GSM198223 ,
GSM198224 ,
GSM198225 ,
GSM198226 ,
GSM198227 ,
GSM198228 ,
GSM198229 ,
GSM286389 ,
GSM286390 ,
GSM286391 ,
GSM286392 ,
GSM286393 ,
GSM286394 ,
GSM286395 ,
GSM286396 ,
GSM286397 ,
GSM286398 ,
GSM286399 ,
GSM286400 ,
GSM286401 ,
GSM286402 ,
GSM286403 ,
GSM286404 ,
GSM1022934 ,
GSM1022935 ,
GSM1022936 ,
GSM1022937 Series (9)
GSE1133 tissue-specific pattern of mRNA expression
GSE3746 Circadian skeletal muscle_wt and Clock mutants
GSE3748 Circadian liver_wt and Clock mutants
GSE3751 Circadian rhythm in clock mutants
GSE3800 Comparison between naïve, tolerant and memory CD8+ T cells
GSE5961 Genome-wide association analysis in diverse inbred mice: power and population structure
GSE8028 Pathway analysis of expression QTL data in fat identifies a role for cyclin H in oxidative phosphorylation
GSE11339 GNF mouse atlas_macrophages
GSE41702 Differential gene expression profiles between myeloid-biased and lymphoid-biased hematopoietic stem cells.
Data table header descriptions ID Probe Set Name
Identifier_Source Identifier_Source
Description Description
CLONE_ID clone identifier
Sequence_Type Sequence Type
SEQUENCE SPOT_ID Column added by GEO staff to facilitate sequence tracking in Entrez GEO
GB_ACC GenBank Accession Number
Data table ID Identifier_Source Description CLONE_ID Sequence_Type SEQUENCE SPOT_ID GB_ACC AFFX-18SRNAMur/X00686_3_at
GenBank
M. musculus /GEN=18S rRNA /DB_XREF=gb:X00686.1 /DEF=Mouse gene for 18S rRNA.
Control Sequence
X00686.1 AFFX-18SRNAMur/X00686_5_at
GenBank
M. musculus /GEN=18S rRNA /DB_XREF=gb:X00686.1 /DEF=Mouse gene for 18S rRNA.
Control Sequence
X00686.1 AFFX-18SRNAMur/X00686_M_at
GenBank
M. musculus /GEN=18S rRNA /DB_XREF=gb:X00686.1 /DEF=Mouse gene for 18S rRNA.
Control Sequence
X00686.1 AFFX-b-ActinMur/M12481_3_at
GenBank
M. musculus /GEN=beta-actin /DB_XREF=gb:M12481.1 /DEF=Mouse cytoplasmic beta-actin mRNA.
Control Sequence
TTCCATCATGAAGTGTGACGTTGACATCCGTAAAGACCTCTATGCCAACACAGTGCTGTCTGGTGGTACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATTACTGCTCTGGCTCCTAGCACCATGAAGATCAAGATCATTGCTCCTCCTGAGCGCAAGTACTCTGTGTGGATCGGTGGCTCCATCCTGGCCTCACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTACGATGAGTCCGGCCCCTCCATCGTGCACCGCAAGTGCTTCTAGGCGGACTGTTACTGAGCTGCGTTT M12481.1 AFFX-b-ActinMur/M12481_5_at
GenBank
M. musculus /GEN=beta-actin /DB_XREF=gb:M12481.1 /DEF=Mouse cytoplasmic beta-actin mRNA.
Control Sequence
GAAGGACTCCTATGTGGGTGACGAGGCCCAGAGCAAGAGAGGTATCCTGACCCTGAAGTACCCCATTGAACATGGCATTGTTACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTGGCCCCTGAGGAGCACCCTGTGCTGCTCACCGAGGCCCCCCTGAACCCTAAGGCCAACCGTGAAAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTAGCCATCCAGGCTGTGCTGTCCCTGTATGCCTCTGGTCGT M12481.1 AFFX-b-ActinMur/M12481_M_at
GenBank
M. musculus /GEN=beta-actin /DB_XREF=gb:M12481.1 /DEF=Mouse cytoplasmic beta-actin mRNA.
Control Sequence
ACTACCTCATGAAGATCCTGACCGAGCGTGGCTACAGCTTCACCACCACAGCTGAGAGGGAAATCGTGCGTGACATCAAAGAGAAGCTGTGCTATGTTGCTCTAGACTTCGAGCAGGAGATGGCCACTGCCGCATCCTCTTCCTCCCTGGAGAAGAGCTATGAGCTGCCTGACGGCCAGGTCATCACTATTGGCAACGAGCGGTTCCGATGCCCTGAGGCTCTTTTCCAGCCTT M12481.1 AFFX-BioB-3_at
GenBank
E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2755-3052 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
Control Sequence
J04423.1 AFFX-BioB-5_at
GenBank
E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2032-2305 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
Control Sequence
J04423.1 AFFX-BioB-M_at
GenBank
E. coli /GEN=bioB /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 2482-2739 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
Control Sequence
J04423.1 AFFX-BioC-3_at
GenBank
E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4626-4878 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
Control Sequence
J04423.1 AFFX-BioC-5_at
GenBank
E. coli /GEN=bioC /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4218-4566 of gb:J04423.1 /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
Control Sequence
J04423.1 AFFX-BioDn-3_at
GenBank
E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 5286-5570 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
Control Sequence
J04423.1 AFFX-BioDn-5_at
GenBank
E. coli /GEN=bioD /DB_XREF=gb:J04423.1 /NOTE=SIF corresponding to nucleotides 4980-5256 of gb:J04423.1, not 100% identical /DEF=E.coli 7,8-diamino-pelargonic acid (bioA), biotin synthetase (bioB), 7-keto-8-amino-pelargonic acid synthetase (bioF), bioC protein, and dethiobiotin synthetase (bioD), complete cds.
Control Sequence
J04423.1 AFFX-CreX-3_at
GenBank
Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 1089-1495 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.
Control Sequence
X03453.1 AFFX-CreX-5_at
GenBank
Bacteriophage P1 /GEN=cre /DB_XREF=gb:X03453.1 /NOTE=SIF corresponding to nucleotides 513-1047 of gb:X03453.1 /DEF=Bacteriophage P1 cre gene for recombinase protein.
Control Sequence
X03453.1 AFFX-DapX-3_at
GenBank
B. subtilis /GEN=jojG /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2684-3130 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds s.
Control Sequence
L38424.1 AFFX-DapX-5_at
GenBank
B. subtilis /GEN=dapB /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 1428-1926 of gb:L38424.1 /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds s.
Control Sequence
L38424.1 AFFX-DapX-M_at
GenBank
B. subtilis /GEN=dapB, jojF /DB_XREF=gb:L38424.1 /NOTE=SIF corresponding to nucleotides 2020-2580 of gb:L38424.1, not 100% identical /DEF=Bacillus subtilis dihydropicolinate reductase (jojE) gene, complete cds; poly(A) polymerase (jojI) gene, complete cds; biotin acetyl-CoA-carboxylase ligase (birA) gene, complete cds; jojC, jojD, jojF, jojG, jojH genes, complete cds s.
Control Sequence
L38424.1 AFFX-GapdhMur/M32599_3_at
GenBank
M. musculus /GEN=gapd /DB_XREF=gb:M32599.1 /DEF=Mouse glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds.
Control Sequence
GGGCCCACTGAAGGGCATCTTGGGCTACACTGAGGACCAGGTTGTCTCCTGCGACTTCAACAGCAACTCCCACTCTTCCACCTTCGATGCCGGGGCTGGCATTGCTCTCAATGACAACTTTGTCAAGCTCATTTCCTGGTATGACAATGAATACGGCTACAGCAACAGGGTGGTGGACCTCATGGCCTACATGGCCTCCAAGGAGTAAGAAACCCTGGACCACCCACCCCAGCAAGGACACTGAGCAAGAGAGGCCCTATCCCAACTCGGCCCCCAACACTGAGCATCTCCCTCACAATTTCCATCCCAGACC M32599.1 AFFX-GapdhMur/M32599_5_at
GenBank
M. musculus /GEN=gapd /DB_XREF=gb:M32599.1 /DEF=Mouse glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds.
Control Sequence
TGGTCACCAGGGCTGCCATTTGCAGTGGCAAAGTGGAGATTGTTGCCATCAACGACCCCTTCATTGACCTCAACTACATGGTCTACATGTTCCAGTATGACTCCACTCACGGCAAATTCAACGGCACAGTCAAGGCCGAGAATGGGAAGCTTGTCATCAACGGGAAGCCCATCACCATCTTCCAGGAGCGAGACCCCACTAACATCAAATGGGGTGAGGCCGGTGCTGAGTATGTCGTGGAGTCTACTGGTGTCTTCACCACCATGGAGAAGGCCGGGGCCCACTTGAAGGGTGGAGCCAAACGGGTCATCATCTCCGCC M32599.1
31373 16769 Kbytes .
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