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Platform GPL1873 Query DataSets for GPL1873
Status Public on Jul 20, 2005
Title Mouse Compugen 22K oligo
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Mus musculus
 
Description Mouse Compugen 22K oligo
 
Submission date Feb 16, 2005
Last update date Apr 09, 2008
Contact name Darrin F Taylor
E-mail(s) d.taylor@imb.uq.edu.au
Phone +61 7 3346 2607
Organization name Institute for Molecular Bioscience, Uni of Qld
Department Genomics and Bioinformatics
Lab Expression Genomics Lab
Street address Research Rd
City St Lucia
State/province Qld
ZIP/Postal code 4072
Country Australia
 
Samples (53) GSM42291, GSM42292, GSM42293, GSM42294, GSM42295, GSM42296 
Series (6)
GSE2281 15.5dpc Ureteric tree cells Vs rest
GSE2282 Kidney development time course
GSE2284 10.5dpc Metanephric mesenchyme Vs 11.5dpc metanephroi

Data table header descriptions
ID ID
Composite Name Composite Sequence Name
Common Name Common Name
Description Description
Ensembl number Ensembl number
Extra Synonyms Extra Synonyms
GB_ACC GenBank accession
GID GID
Human ortholog Human ortholo
GENE Entrez GENE ID
MGI number MGI number
Map location Map location
Markers Markers
Rat ortholog Rat ortholog
SP function SP function
SP location SP location
Symbol Symbol
TIGR annotation TIGR annotation
TIGR mouse TC TIGR mouse TC
UGI Name UGI Name
UGI cluster UGI cluster
UGI representative UGI representative

Data table
ID Composite Name Common Name Description Ensembl number Extra Synonyms GB_ACC GID Human ortholog GENE MGI number Map location Markers Rat ortholog SP function SP location Symbol TIGR annotation TIGR mouse TC UGI Name UGI cluster UGI representative
CS:02:CGEN_MOUSE_3000002_1 CGEN_MOUSE_3000002_1 Rac1 ENSMUSG00000001847 Synonyms X57277 53885 THC2012383 THC2082235 19353; 100781 TC534996 Rac1 UP|Q6LC82 (Q6LC82) GTPase cRac1A, complete TC1242705 RAS-related C3 botulinum substrate 1 292510 BC003828
CS:03:CGEN_MOUSE_3000003_1 CGEN_MOUSE_3000003_1 Pspn ENSMUSG00000002664 PSP NM_008954 6679510 THC2125225 19197 MGI:1201684 TC563990 Pspn persephin [Mus musculus] NP381355 Persephin 86487 AA681975
CS:04:CGEN_MOUSE_3000004_1 CGEN_MOUSE_3000004_1 Dact1 ENSMUSG00000044548 FRODO, HDPR1, MTNG3, DAPPER, THYEX3, DAPPER1, 4921528D17Rik, dapper 1, thymus expressed gene 3 NM_021532 24158473 THC2097687 59036 MGI:1891740 RH135896 TC562884 Dact1 UP|DAC1_MOUSE (Q8R4A3) Dapper homolog 1 (MDpr1) (Frodo) (Thymus-expressed novel gene-3 protein), complete TC1396364 Dapper homolog 1, antagonist of beta-catenin (xenopus) 46662 AK077691
CS:05:CGEN_MOUSE_3000005_1 CGEN_MOUSE_3000005_1 Nppb ENSMUSG00000029019 BNP NM_008726 31982151 THC2097687 18158 MGI:97368 4 76.5 cM RH124694 TC562884 Acts as a cardiac hormone with a variety of biological actions including natriuresis, diuresis, vasorelaxation, and inhibition of renin and aldosterone secretion. It is thought to play a key role in cardiovascular homeostasis. Helps restore the body's salt and water balance. Improves heart function. Secreted. Nppb UP|ANFB_MOUSE (P40753) Natriuretic peptides B precursor [Contains: Gamma-brain natriuretic peptide; Brain natriuretic peptide (BNP)], complete TC1389724 Natriuretic peptide precursor type B 2740 AI323342
CS:06:CGEN_MOUSE_3000006_1 CGEN_MOUSE_3000006_1 2900064A13Rik ENSMUSG00000055943 c11orf3 AJ278128 9716102 THC2033083 73024 MGI:1920274 4 76.5 cM RH124694 TC536797 Acts as a cardiac hormone with a variety of biological actions including natriuresis, diuresis, vasorelaxation, and inhibition of renin and aldosterone secretion. It is thought to play a key role in cardiovascular homeostasis. Helps restore the body's salt and water balance. Improves heart function. Secreted. 2900064A13Rik homologue to GB|AAQ88810.1|37182014|AY358445 AAAL905 {Homo sapiens;} , partial (95%) TC1386199 RIKEN cDNA 2900064A13 gene 268027 AK033552
CS:07:CGEN_MOUSE_3000007_1 CGEN_MOUSE_3000007_1 Zcchc11 ENSMUSG00000034610 c11orf3 AF194972 11596104 THC2033083 230594; 320841 MGI:1920274 4 76.5 cM RH124694 TC536797 Acts as a cardiac hormone with a variety of biological actions including natriuresis, diuresis, vasorelaxation, and inhibition of renin and aldosterone secretion. It is thought to play a key role in cardiovascular homeostasis. Helps restore the body's salt and water balance. Improves heart function. Secreted. Zcchc11 UP|Q9EQN6 (Q9EQN6) Developmental control protein (Fragment), partial (98%) TC1348061 Zinc finger, CCHC domain containing 11 25181 AK077768
CS:08:CGEN_MOUSE_3000008_1 CGEN_MOUSE_3000008_1 Pik3r2 ENSMUSG00000031834 c11orf3 NM_008841 6679320 THC2023559 18709 MGI:1098772 8 33.5 cM 180423, Y13569 TC535031 Acts as a cardiac hormone with a variety of biological actions including natriuresis, diuresis, vasorelaxation, and inhibition of renin and aldosterone secretion. It is thought to play a key role in cardiovascular homeostasis. Helps restore the body's salt and water balance. Improves heart function. Secreted. Pik3r2 UP|P85B_MOUSE (O08908) Phosphatidylinositol 3-kinase regulatory beta subunit (PI3-kinase p85-beta subunit) (PtdIns-3-kinase p85-beta), complete TC1395372 Phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta) 12945 BC006796
CS:09:CGEN_MOUSE_3000009_1 CGEN_MOUSE_3000009_1 Inpp5b ENSMUSG00000028894 75kDa, INPP5P, inositol polyphosphate-5-phosphatase, 75 kDa NM_008385 30231212 THC2038150 16330 MGI:103257 4 56.0 cM 874496, AW260155 TC518941 Acts as a cardiac hormone with a variety of biological actions including natriuresis, diuresis, vasorelaxation, and inhibition of renin and aldosterone secretion. It is thought to play a key role in cardiovascular homeostasis. Helps restore the body's salt and water balance. Improves heart function. Secreted. Inpp5b UP|Q8K337 (Q8K337) Inositol polyphosphate-5-phosphatase B, complete TC1403325 Inositol polyphosphate-5-phosphatase B 296202 AY007563
CS:10:CGEN_MOUSE_3000010_1 CGEN_MOUSE_3000010_1 Ott ENSMUSG00000028894 75kDa, INPP5P, inositol polyphosphate-5-phosphatase, 75 kDa X96606 1236762 THC2038150 18422 MGI:107573 X 62.5 cM 874496, AW260155 TC518941 Acts as a cardiac hormone with a variety of biological actions including natriuresis, diuresis, vasorelaxation, and inhibition of renin and aldosterone secretion. It is thought to play a key role in cardiovascular homeostasis. Helps restore the body's salt and water balance. Improves heart function. Secreted. Ott UP|Q62012 (Q62012) Ott protein, complete TC1390142 Ovary testis transcribed 327405 NM_011022
CS:11:CGEN_MOUSE_3000011_1 CGEN_MOUSE_3000011_1 Prkcz ENSMUSG00000029053 Pkcz, zetaPKC NM_008860 6679354 THC2038150 18762 MGI:97602 4 83.0 cM R74924, Pkcz, Prkcz, AI098070, RH125130, RH126922 TC518941 Acts as a cardiac hormone with a variety of biological actions including natriuresis, diuresis, vasorelaxation, and inhibition of renin and aldosterone secretion. It is thought to play a key role in cardiovascular homeostasis. Helps restore the body's salt and water balance. Improves heart function. Secreted. Prkcz protein kinase C, zeta [Mus musculus] TC1407201 Protein kinase C, zeta 28561 BC072590
CS:12:CGEN_MOUSE_3000012_1 CGEN_MOUSE_3000012_1 Prss11 ENSMUSG00000006205 L56, HTRA, HtrA1, RSPP11, insulin-like growth factor binding protein 5 protease NM_019564 9625026 THC2012763 56213 MGI:1929076 4 83.0 cM 427798, AI429470 TC570281 Protease that regulate the availability of IGFs by cleaving IGF-binding proteins (By similarity). Secreted (By similarity). Prss11 UP|Q9QZK6 (Q9QZK6) Insulin-like growth factor binding protein 5 protease, complete TC1403047 Protease, serine, 11 (Igf binding) 30156 BC013516
CS:13:CGEN_MOUSE_3000013_1 CGEN_MOUSE_3000013_1 Muc2 ENSMUSG00000006205 L56, HTRA, HtrA1, RSPP11, insulin-like growth factor binding protein 5 protease AF016695 4102820 THC2034370 17831; 17833 MGI:1929076 4 83.0 cM 427798, AI429470 TC542001 Protease that regulate the availability of IGFs by cleaving IGF-binding proteins (By similarity). Secreted (By similarity). Muc2 UP|Q80Z19 (Q80Z19) Secreted gel-forming mucin (Fragment), complete TC1308305 Mucin 2 2041 XM_133960
CS:14:CGEN_MOUSE_3000014_1 CGEN_MOUSE_3000014_1 Ran ENSMUSG00000029430 L56, HTRA, HtrA1, RSPP11, insulin-like growth factor binding protein 5 protease AF159256 5566234 THC2012100 THC2085715 19384 MGI:1333112 4 83.0 cM 427798, AI429470 TC516835 Protease that regulate the availability of IGFs by cleaving IGF-binding proteins (By similarity). Secreted (By similarity). Ran GB|AAH04272.2|13279086|BC004272 RAN protein {Homo sapiens;} , partial (97%) TC1243219 RAN, member RAS oncogene family 297440 AK075900
CS:15:CGEN_MOUSE_3000015_1 CGEN_MOUSE_3000015_1 Agc1 ENSMUSG00000030607 Agc, cmd, Cspg1, cartilage matrix deficiency, aggrecan, structural proteoglycan of cartilage NM_007424 6671522 THC2049086 11595 MGI:99602 7 39.0 cM 2303, L07049, Agc1 TC516835 Protease that regulate the availability of IGFs by cleaving IGF-binding proteins (By similarity). Secreted (By similarity). Mfge8 UP|PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific proteoglycan core protein) (CSPCP), partial (84%) TC1397954 Aggrecan 1 358571 L07049
CS:16:CGEN_MOUSE_3000016_1 CGEN_MOUSE_3000016_1 Rgn ENSMUSG00000023070 SMP30 NM_009060 6677738 THC2017461 THC2017462 19733 MGI:108024 7 39.0 cM 393870, AI265316 TC572880 May play a role in the regulation of enzymatic activity in the liver. Decrease of SMP30 leads to the dysregulation of calcium signaling in the aged liver. Cytoplasmic. Rgn UP|SM30_MOUSE (Q64374) Senescence marker protein-30 (SMP-30) (Regucalcin) (RC), complete TC1404386 Regucalcin 2118 BC012710
CS:17:CGEN_MOUSE_3000017_1 CGEN_MOUSE_3000017_1 Muc6 ENSMUSG00000048191 gastric mucin-like protein AJ010752 3559941 THC2017461 THC2017462 353328 MGI:2663233 7 68.98 cM 393870, AI265316 TC572880 May play a role in the regulation of enzymatic activity in the liver. Decrease of SMP30 leads to the dysregulation of calcium signaling in the aged liver. Cytoplasmic. Muc6 UP|Q80T03 (Q80T03) MUC6, complete TC1408739 Mucin 6, gastric 246621 NM_181729
CS:18:CGEN_MOUSE_3000018_1 CGEN_MOUSE_3000018_1 Fshb ENSMUSG00000027120 gastric mucin-like protein NM_008045 40254640 THC2052008 14308 MGI:95582 2 60.0 cM 393870, AI265316 TC522885 May play a role in the regulation of enzymatic activity in the liver. Decrease of SMP30 leads to the dysregulation of calcium signaling in the aged liver. Cytoplasmic. Fshb UP|FSHB_MOUSE (Q60687) Follitropin beta chain precursor (Follicle-stimulating hormone beta subunit) (FSH-beta) (FSH-B), complete TC1396637 Follicle stimulating hormone beta 249525 BC061159
CS:19:CGEN_MOUSE_3000019_1 CGEN_MOUSE_3000019_1 Crisp3 ENSMUSG00000025431 Aeg2, CRS3, SGP28, CRISP-3, acidic epididymal glycoprotein 2 NM_009639 6753003 THC2052008 11572 MGI:102552 17 21.0 cM 393870, AI265316 TC522885 May play a role in the regulation of enzymatic activity in the liver. Decrease of SMP30 leads to the dysregulation of calcium signaling in the aged liver. Cytoplasmic. Crisp3 UP|AEG2_MOUSE (Q03402) Sperm-coating glycoprotein 2 precursor (SCP 2) (Acidic epididymal glycoprotein 2) (Cysteine-rich secretory protein-3) (Crisp-3), complete TC1401325 Cysteine-rich secretory protein 3 347391 BC022573
CS:20:CGEN_MOUSE_3000020_1 CGEN_MOUSE_3000020_1 Rnf8 ENSMUSG00000024020 Aeg2, CRS3, SGP28, CRISP-3, acidic epididymal glycoprotein 2 AJ242721 8052305 THC2014169 58230; 78204; 445272 MGI:102552 17 21.0 cM 393870, AI265316 TC541980 May play a role in the regulation of enzymatic activity in the liver. Decrease of SMP30 leads to the dysregulation of calcium signaling in the aged liver. Cytoplasmic. Rnf8 UP|RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (RING finger protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) , complete TC1404065 Ring finger protein 8 305994 AK086516
CS:21:CGEN_MOUSE_3000021_1 CGEN_MOUSE_3000021_1 Acp2 ENSMUSG00000002103 LAP, Acp-2 X57199 52870 THC2033646 11432 MGI:87882 2 52.0 cM C86680 TC568899 May play a role in the regulation of enzymatic activity in the liver. Decrease of SMP30 leads to the dysregulation of calcium signaling in the aged liver. Cytoplasmic. Acp2 UP|PPAL_MOUSE (P24638) Lysosomal acid phosphatase precursor (LAP) , complete TC1386317 Acid phosphatase 2, lysosomal 45570 AK128963

Total number of rows: 22702

Table truncated, full table size 12221 Kbytes.






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