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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 01, 2017 |
| Title |
NanoString nCounter GX 19 Custom |
| Technology type |
other |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
NanoString |
| Manufacture protocol |
See manufacturer's website (http://www.nanostring.com)
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| Submission date |
May 27, 2016 |
| Last update date |
May 27, 2016 |
| Contact name |
Steve Rozen |
| Organization name |
Duke-NUS
|
| Street address |
8 College Road
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| City |
Singapore |
| ZIP/Postal code |
169857 |
| Country |
Singapore |
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| Samples (275)
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GSM2179386, GSM2179387, GSM2179388, GSM2179389, GSM2179390, GSM2179391
GSM2179392, GSM2179393, GSM2179394, GSM2179395, GSM2179396, GSM2179397, GSM2179398, GSM2179399, GSM2179400, GSM2179401, GSM2179402, GSM2179403, GSM2179404, GSM2179405, GSM2179406, GSM2179407, GSM2179408, GSM2179409, GSM2179410, GSM2179411, GSM2179412, GSM2179413, GSM2179414, GSM2179415, GSM2179416, GSM2179417, GSM2179418, GSM2179419, GSM2179420, GSM2179421, GSM2179422, GSM2179423, GSM2179424, GSM2179425, GSM2179426, GSM2179427, GSM2179428, GSM2179429, GSM2179430, GSM2179431, GSM2179432, GSM2179433, GSM2179434, GSM2179435, GSM2179436, GSM2179437, GSM2179438, GSM2179439, GSM2179440, GSM2179441, GSM2179442, GSM2179443, GSM2179444, GSM2179445, GSM2179446, GSM2179447, GSM2179448, GSM2179449, GSM2179450, GSM2179451, GSM2179452, GSM2179453, GSM2179454, GSM2179455, GSM2179456, GSM2179457, GSM2179458, GSM2179459, GSM2179460, GSM2179461, GSM2179462, GSM2179463, GSM2179464, GSM2179465, GSM2179466, GSM2179467, GSM2179468, GSM2179469, GSM2179470, GSM2179471, GSM2179472, GSM2179473, GSM2179474, GSM2179475, GSM2179476, GSM2179477, GSM2179478, GSM2179479, GSM2179480, GSM2179481, GSM2179482, GSM2179483, GSM2179484, GSM2179485, GSM2179486, GSM2179487, GSM2179488, GSM2179489, GSM2179490, GSM2179491, GSM2179492, GSM2179493, GSM2179494, GSM2179495, GSM2179496, GSM2179497, GSM2179498, GSM2179499, GSM2179500, GSM2179501, GSM2179502, GSM2179503, GSM2179504, GSM2179505, GSM2179506, GSM2179507, GSM2179508, GSM2179509, GSM2179510, GSM2179511, GSM2179512, GSM2179513, GSM2179514, GSM2179515, GSM2179516, GSM2179517, GSM2179518, GSM2179519, GSM2179520, GSM2179521, GSM2179522, GSM2179523, GSM2179524, GSM2179525, GSM2179526, GSM2179527, GSM2179528, GSM2179529, GSM2179530, GSM2179531, GSM2179532, GSM2179533, GSM2179534, GSM2179535, GSM2179536, GSM2179537, GSM2179538, GSM2179539, GSM2179540, GSM2179541, GSM2179542, GSM2179543, GSM2179544, GSM2179545, GSM2179546, GSM2179547, GSM2179548, GSM2179549, GSM2179550, GSM2179551, GSM2179552, GSM2179553, GSM2179554, GSM2179555, GSM2179556, GSM2179557, GSM2179558, GSM2179559, GSM2179560, GSM2179561, GSM2179562, GSM2179563, GSM2179564, GSM2179565, GSM2179566, GSM2179567, GSM2179568, GSM2179569, GSM2179570, GSM2179571, GSM2179572, GSM2179573, GSM2179574, GSM2179575, GSM2179576, GSM2179577, GSM2179578, GSM2179579, GSM2179580, GSM2179581, GSM2179582, GSM2179583, GSM2179584, GSM2179585, GSM2179586, GSM2179587, GSM2179588, GSM2179589, GSM2179590, GSM2179591, GSM2179592, GSM2179593, GSM2179594, GSM2179595, GSM2179596, GSM2179597, GSM2179598, GSM2179599, GSM2179600, GSM2179601, GSM2179602, GSM2179603, GSM2179604, GSM2179605, GSM2179606, GSM2179607, GSM2179608, GSM2179609, GSM2179610, GSM2179611, GSM2179612, GSM2179613, GSM2179614, GSM2179615, GSM2179616, GSM2179617, GSM2179618, GSM2179619, GSM2179620, GSM2179621, GSM2179622, GSM2179623, GSM2179624, GSM2179625, GSM2179626, GSM2179627, GSM2179628, GSM2179629, GSM2179630, GSM2179631, GSM2179632, GSM2179633, GSM2179634, GSM2179635, GSM2179636, GSM2179637, GSM2179638, GSM2179639, GSM2179640, GSM2179641, GSM2179642, GSM2179643, GSM2179644, GSM2179645, GSM2179646, GSM2179647, GSM2179648, GSM2179649, GSM2179650, GSM2179651, GSM2179652, GSM2179653, GSM2179654, GSM2179655, GSM2179656, GSM2179657, GSM2179658, GSM2179659, GSM2179660
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| Series (3) |
| GSE81983 |
Expression data from early stage CRC patients' tumors [NanoString-Design] |
| GSE81985 |
Expression data from early stage CRC patients' tumors [NanoString-Test] |
| GSE81986 |
An FFPE-based prognostic signature to predict metastasis in stage I/II microsatellite stable colorectal cancer |
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| Data table header descriptions |
| ID |
|
| GB_ACC |
GeneBank Accession number |
| Code_Class |
Class of target (Endogenous, Housekeeping, Negative, Positive) |
| NS_Probe_ID |
NanoString Unique Probe ID |
| SPOT_ID |
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| Target_Sequence |
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| Data table |
| ID |
GB_ACC |
Code_Class |
NS_Probe_ID |
SPOT_ID |
Target_Sequence |
| AAR2 |
NM_015511.4 |
Endogeneous |
NM_015511.4:2404 |
AAR2 |
GGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGA |
| ACOT8 |
NM_005469.2 |
Endogeneous |
NM_005469.2:530 |
ACOT8 |
GCTGCTTGACTGTGAGACCCTCATTGACCAGTATTTAAGGGACCCTAACCTCCAAAAGAGGTACCCATTGGCGCTCAACCGAATTGCTGCTCAGGAGGTC |
| ACTR5 |
NM_024855.3 |
Endogeneous |
NM_024855.3:1840 |
ACTR5 |
CAGGCATAGCAGAGGCCCTCCAGAGAGACTGCCCTGCACGCCATGCCTTGGGCCACGTTGGCAGTGTGACAGGACTGTGATTGTGCTAGATGTACCTGCC |
| ADAM22 |
NM_021723.3 |
Endogeneous |
NM_021723.3:4822 |
ADAM22 |
ATGACAGGAAGGGATGTGATTGTTGATATGACCATAAAGCGATCCATCAGGCCAAGGTTTGGGTGAGTGTTGGGCAGTGTTGCCACATAGCTCAAGCCAA |
| AGPAT3 |
NM_020132.4 |
Endogeneous |
NM_020132.4:5622 |
AGPAT3 |
GTAACTGTAAAGGAAAATCTCTCTCTCTGGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTTTTTCTATGATTGAAAATC |
| AGR2 |
NM_006408.3 |
Endogeneous |
NM_006408.3:580 |
AGR2 |
GACCCATCTCTGACAGTTAGAGCCGATATCACTGGAAGATATTCAAATCGTCTCTATGCTTACGAACCTGCAGATACAGCTCTGTTGCTTGACAACATGA |
| AGR3 |
NM_176813.3 |
Endogeneous |
NM_176813.3:0 |
AGR3 |
AGAAACATCCAGAATACATTTCCAACAAGAGCACTGGCCAAGTCAGCTTCTTCTGAGAGAGTCTCTAGAAGACATGATGCTACACTCAGCTTTGGGTCTC |
| AKAP13 |
NM_007200.4 |
Endogeneous |
NM_007200.4:4915 |
AKAP13 |
CGATGCAGAAATGAACCACCGGAGTTCAATGCGAGTTCTTGGGGATGTTGTCAGGAGACCTCCCATTCATAGGAGAAGTTTCAGTCTAGAAGGCTTGACA |
| ALAD |
NM_000031.5 |
Endogeneous |
NM_000031.5:542 |
ALAD |
ACCTCCTGGTGGCCTGTGATGTCTGCCTGTGTCCCTACACCTCCCATGGTCACTGCGGGCTCCTGAGTGAAAACGGAGCATTCCGGGCTGAGGAGAGCCG |
| ANG |
NM_001097577.2 |
Endogeneous |
NM_001097577.2:528 |
ANG |
GTCCACTTGGATCAGTCAATTTTCCGTCGTCCGTAACCAGCGGGCCCCTGGTCAAGTGCTGGCTCTGCTGTCCTTGCCTTCCATTTCCCCTCTGCACCCA |
| ANO1 |
NM_018043.5 |
Endogeneous |
NM_018043.5:3998 |
ANO1 |
GAGTTGTTCATCTTCCTTATGGGACAAAACCGGTTGACCAGAAAATGGGCAGAGAGAGATGACCTCGGAAGCATTTCCACAGATGGTGTCAGGGTTTCAA |
| ANXA13 |
NM_004306.2 |
Endogeneous |
NM_004306.2:460 |
ANXA13 |
AGGCTATTTGATAGGAGCCTCGAATCAGATGTCAAAGGTGATACAAGTGGAAACCTAAAAAAAATCCTGGTGTCTCTGCTGCAGGCTAATCGCAATGAAG |
| APP |
NM_000484.3 |
Endogeneous |
NM_000484.3:1725 |
APP |
TAAAGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGTTATGACACACCTCCGTGTGATTTATGAGCGCATGAA |
| AQP3 |
NM_004925.3 |
Endogeneous |
NM_004925.3:1335 |
AQP3 |
CCCAGAGACAGGGGAAGGCAGCCTGTCCATCTGTGCATAAGGAGAGGAAAGTTCCAGGGTGTGTATGTTTCAGGGGCTTCACATGGAGGAGCTGCAGATA |
| ARHGAP32 |
NM_001142685.1 |
Endogeneous |
NM_001142685.1:2100 |
ARHGAP32 |
CTCCGTTCAGCTAAAAGTGAGGAGTCTCTTACATCTCTCCATGCAGTTGATGGTGATTCTAAGCTCTTCCGACCCAGAAGACCCAGATCTTCCAGTGATG |
| ARHGEF28 |
NM_001080479.2 |
Endogeneous |
NM_001080479.2:4945 |
ARHGEF28 |
TGCCACTTACCCTACAACTCAATCTCATTCTGACTTGGTGAGGACTAGTGAACATCAAGTAGACCTCAAGGTGGACCCTTCTCAGCCTTCGAATGTCAGT |
| ATP6V0E2 |
NR_110612.1 |
Endogeneous |
NR_110612.1:2509 |
ATP6V0E2 |
ACGACAGCCTCACTTCTGTATGGACTGCTGATGTGGCCTGCCATCCTGTTCAGCGGGCATTGTCTTTGGAGCAGCAGGAGAATAGGATGCCTCTCACTCA |
| B4GALT1 |
NM_001497.3 |
Endogeneous |
NM_001497.3:1270 |
B4GALT1 |
ACACAAAGGAGACAATGCTCTCTGATGGTTTGAACTCACTCACCTACCAGGTGCTGGATGTACAGAGATACCCATTGTATACCCAAATCACAGTGGACAT |
| BMP2K |
XM_005263117.1 |
Endogeneous |
XM_005263117.1:875 |
BMP2K |
CAAGGCTGATATCTGGGCACTGGGATGTCTACTCTATAAACTTTGTTTCTTCACTCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGATGGCAACTTC |
| BTBD8 |
NM_183242.3 |
Endogeneous |
NM_183242.3:1054 |
BTBD8 |
TTATATATGGAGGAACTCTGGACATTCCAGACAAAACTAATGTTGGTCAGATACTCAATATGGCTGATATGTATGGACTAGAAGGATTAAAAGAAGTAGC |
Total number of rows: 221
Table truncated, full table size 32 Kbytes.
| Supplementary data files not provided |
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