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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 27, 2020 |
| Title |
NanoString nCounter Human miRGE Expression Assay Custom CodeSet [WHEL] |
| Technology type |
other |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
NanoString Technologies, Inc. |
| Manufacture protocol |
https://www.nanostring.com/products/mirna-assays/mirge-assay
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| Submission date |
Mar 17, 2020 |
| Last update date |
Mar 27, 2020 |
| Contact name |
Loki Natarajan |
| E-mail(s) |
loki@math.ucsd.edu
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| Organization name |
University of California, San Diego
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| Street address |
3855 Health Sciences DR
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| City |
La Jolla |
| ZIP/Postal code |
92093-0901 |
| Country |
USA |
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| Samples (1253)
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GSM4417738, GSM4417739, GSM4417740, GSM4417741, GSM4417742, GSM4417743
GSM4417744, GSM4417745, GSM4417746, GSM4417747, GSM4417748, GSM4417749, GSM4417750, GSM4417751, GSM4417752, GSM4417753, GSM4417754, GSM4417755, GSM4417756, GSM4417757, GSM4417758, GSM4417759, GSM4417760, GSM4417761, GSM4417762, GSM4417763, GSM4417764, GSM4417765, GSM4417766, GSM4417767, GSM4417768, GSM4417769, GSM4417770, GSM4417771, GSM4417772, GSM4417773, GSM4417774, GSM4417775, GSM4417776, GSM4417777, GSM4417778, GSM4417779, GSM4417780, GSM4417781, GSM4417782, GSM4417783, GSM4417784, GSM4417785, GSM4417786, GSM4417787, GSM4417788, GSM4417789, GSM4417790, GSM4417791, GSM4417792, GSM4417793, GSM4417794, GSM4417795, GSM4417796, GSM4417797, GSM4417798, GSM4417799, GSM4417800, GSM4417801, GSM4417802, GSM4417803, GSM4417804, GSM4417805, GSM4417806, GSM4417807, GSM4417808, GSM4417809, GSM4417810, GSM4417811, GSM4417812, GSM4417813, GSM4417814, GSM4417815, GSM4417816, GSM4417817, GSM4417818, GSM4417819, GSM4417820, GSM4417821, GSM4417822, GSM4417823, GSM4417824, GSM4417825, GSM4417826, GSM4417827, GSM4417828, GSM4417829, GSM4417830, GSM4417831, GSM4417832, GSM4417833, GSM4417834, GSM4417835, GSM4417836, GSM4417837, GSM4417838, GSM4417839, GSM4417840, GSM4417841, GSM4417842, GSM4417843, GSM4417844, GSM4417845, GSM4417846, GSM4417847, GSM4417848, GSM4417849, GSM4417850, GSM4417851, GSM4417852, GSM4417853, GSM4417854, GSM4417855, GSM4417856, GSM4417857, GSM4417858, GSM4417859, GSM4417860, GSM4417861, GSM4417862, GSM4417863, GSM4417864, GSM4417865, GSM4417866, GSM4417867, GSM4417868, GSM4417869, GSM4417870, GSM4417871, GSM4417872, GSM4417873, GSM4417874, GSM4417875, GSM4417876, GSM4417877, GSM4417878, GSM4417879, GSM4417880, GSM4417881, GSM4417882, GSM4417883, GSM4417884, GSM4417885, GSM4417886, GSM4417887, GSM4417888, GSM4417889, GSM4417890, GSM4417891, GSM4417892, GSM4417893, GSM4417894, GSM4417895, GSM4417896, GSM4417897, GSM4417898, GSM4417899, GSM4417900, GSM4417901, GSM4417902, GSM4417903, GSM4417904, GSM4417905, GSM4417906, GSM4417907, GSM4417908, GSM4417909, GSM4417910, GSM4417911, GSM4417912, GSM4417913, GSM4417914, GSM4417915, GSM4417916, GSM4417917, GSM4417918, GSM4417919, GSM4417920, GSM4417921, GSM4417922, GSM4417923, GSM4417924, GSM4417925, GSM4417926, GSM4417927, GSM4417928, GSM4417929, GSM4417930, GSM4417931, GSM4417932, GSM4417933, GSM4417934, GSM4417935, GSM4417936, GSM4417937, GSM4417938, GSM4417939, GSM4417940, GSM4417941, GSM4417942, GSM4417943, GSM4417944, GSM4417945, GSM4417946, GSM4417947, GSM4417948, GSM4417949, GSM4417950, GSM4417951, GSM4417952, GSM4417953, GSM4417954, GSM4417955, GSM4417956, GSM4417957, GSM4417958, GSM4417959, GSM4417960, GSM4417961, GSM4417962, GSM4417963, GSM4417964, GSM4417965, GSM4417966, GSM4417967, GSM4417968, GSM4417969, GSM4417970, GSM4417971, GSM4417972, GSM4417973, GSM4417974, GSM4417975, GSM4417976, GSM4417977, GSM4417978, GSM4417979, GSM4417980, GSM4417981, GSM4417982, GSM4417983, GSM4417984, GSM4417985, GSM4417986, GSM4417987, GSM4417988, GSM4417989, GSM4417990, GSM4417991, GSM4417992, GSM4417993, GSM4417994, GSM4417995, GSM4417996, GSM4417997, GSM4417998, GSM4417999, GSM4418000, GSM4418001, GSM4418002, GSM4418003, GSM4418004, GSM4418005, GSM4418006, GSM4418007, GSM4418008, GSM4418009, GSM4418010, GSM4418011, GSM4418012, GSM4418013, GSM4418014, GSM4418015, GSM4418016, GSM4418017, GSM4418018, GSM4418019, GSM4418020, GSM4418021, GSM4418022, GSM4418023, GSM4418024, GSM4418025, GSM4418026, GSM4418027, GSM4418028, GSM4418029, GSM4418030, GSM4418031, GSM4418032, GSM4418033, GSM4418034, GSM4418035, GSM4418036, GSM4418037, GSM4418038, GSM4418039, GSM4418040, GSM4418041, GSM4418042, GSM4418043, GSM4418044, GSM4418045, GSM4418046, GSM4418047, GSM4418048, GSM4418049, GSM4418050, GSM4418051, GSM4418052, GSM4418053, GSM4418054, GSM4418055, GSM4418056, GSM4418057, GSM4418058, GSM4418059, GSM4418060, GSM4418061, GSM4418062, GSM4418063, GSM4418064, GSM4418065, GSM4418066, GSM4418067, GSM4418068, GSM4418069, GSM4418070, GSM4418071, GSM4418072, GSM4418073, GSM4418074, GSM4418075, GSM4418076, GSM4418077, GSM4418078, GSM4418079, GSM4418080, GSM4418081, GSM4418082, GSM4418083, GSM4418084, GSM4418085, GSM4418086, GSM4418087, GSM4418088, GSM4418089, GSM4418090, GSM4418091, GSM4418092, GSM4418093, GSM4418094, GSM4418095, GSM4418096, GSM4418097, GSM4418098, GSM4418099, GSM4418100, GSM4418101, GSM4418102, GSM4418103, GSM4418104, GSM4418105, GSM4418106, GSM4418107, GSM4418108, GSM4418109, GSM4418110, GSM4418111, GSM4418112, GSM4418113, GSM4418114, GSM4418115, GSM4418116, GSM4418117, GSM4418118, GSM4418119, GSM4418120, GSM4418121, GSM4418122, GSM4418123, GSM4418124, GSM4418125, GSM4418126, GSM4418127, GSM4418128, GSM4418129, GSM4418130, GSM4418131, GSM4418132, GSM4418133, GSM4418134, GSM4418135, GSM4418136, GSM4418137, GSM4418138, GSM4418139, GSM4418140, GSM4418141, GSM4418142, GSM4418143, GSM4418144, GSM4418145, GSM4418146, GSM4418147, GSM4418148, GSM4418149, GSM4418150, GSM4418151, GSM4418152, GSM4418153, GSM4418154, GSM4418155, GSM4418156, GSM4418157, GSM4418158, GSM4418159, GSM4418160, GSM4418161, GSM4418162, GSM4418163, GSM4418164, GSM4418165, GSM4418166, GSM4418167, GSM4418168, GSM4418169, GSM4418170, GSM4418171, GSM4418172, GSM4418173, GSM4418174, GSM4418175, GSM4418176, GSM4418177, GSM4418178, GSM4418179, GSM4418180, GSM4418181, GSM4418182, GSM4418183, GSM4418184, GSM4418185, GSM4418186, GSM4418187, GSM4418188, GSM4418189, GSM4418190, GSM4418191, GSM4418192, GSM4418193, GSM4418194, GSM4418195, GSM4418196, GSM4418197, GSM4418198, GSM4418199, GSM4418200, GSM4418201, GSM4418202, GSM4418203, GSM4418204, GSM4418205, GSM4418206, GSM4418207, GSM4418208, GSM4418209, GSM4418210, GSM4418211, GSM4418212, GSM4418213, GSM4418214, GSM4418215, GSM4418216, GSM4418217, GSM4418218, GSM4418219, GSM4418220, GSM4418221, GSM4418222, GSM4418223, GSM4418224, GSM4418225, GSM4418226, GSM4418227, GSM4418228, GSM4418229, GSM4418230, GSM4418231, GSM4418232, GSM4418233, GSM4418234, GSM4418235, GSM4418236, GSM4418237...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
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| Series (1) |
| GSE147126 |
mRNAs and miRNAs for Women's Healthy Eating and Living (WHEL) Study |
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| Data table header descriptions |
| ID |
|
| CodeClass |
nCounter classification: positive control (Positive1 for mRNAs and Positive2 for miRNAs), negative control, or endogenous transcript |
| Name |
Name of the mRNA or miRNA target; NanoString ID (positive/negative controls) |
| Accession |
|
| Targeted Region |
Location of the target sequence within the transcript |
| SEQUENCE |
Sequence of the mRNA or miRNA transcript targeted for hybridization of the CodeSet Capture and Reporter probes |
| Data table |
| ID |
CodeClass |
Name |
Accession |
Targeted Region |
SEQUENCE |
| ACOT7 |
Endogenous1 |
ACOT7 |
NM_007274.3 |
1702-1801 |
GAGCGCCGGGAGGCGTTGGGCAGAAACCCTCGGGAATGCTTCCGAGCACGCTGTAGGGTATGGGAAGAACCCAGCACCACTAATAAAGCTGCTGCTTGGC |
| ACTB |
Endogenous1 |
ACTB |
NM_001101.2 |
1686-1785 |
CCAACTTGAGATGTATGAAGGCTTTTGGTCTCCCTGGGAGTGGGTGGAGGCAGCCAGGGCTTACCTGTACACTGACTTGAGACCAGTTGAATAAAAGTGC |
| ACTR3B |
Endogenous1 |
ACTR3B |
NM_001040135.1 |
906-1005 |
CCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATC |
| ADM |
Endogenous1 |
ADM |
NM_001124.1 |
1301-1400 |
GCGAGGTGTAAAGTTGTTCGCCGCGTGGAATGTGAGTGTGTTTGTGTGCATGAAAGAGAAAGACTGATTACCTCCTGTGTGGAAGAAGGAAACACCGAGT |
| ALDOA |
Endogenous1 |
ALDOA |
NM_184041.2 |
1456-1555 |
AGGCTGGCTTGCCCGCGCTCTTTCTTCCCTCGTGACAGTGGTGTGTGGTGTCGTCTGTGAATGCTAAGTCCATCACCCTTTCCGGCACACTGCCAAATAA |
| ANGPTL4 |
Endogenous1 |
ANGPTL4 |
NM_001039667.1 |
1137-1236 |
CACCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGC |
| ANLN |
Endogenous1 |
ANLN |
NM_018685.2 |
241-340 |
CGTGCCAGGCGAGAGAATCTTCAGAGAAAAATGGCTGAGAGGCCCACAGCAGCTCCAAGGTCTATGACTCATGCTAAGCGAGCTAGACAGCCACTTTCAG |
| AURKA |
Endogenous1 |
AURKA |
NM_198433.1 |
311-410 |
AGGCGCCCTGTAGGATACTGCTTGTTACTTATTACAGCTAGAGGGTCTCACTCCATTGCCCAGGCCAGAGTGCGGGGATATTTGATAAGAAACTTCAGTG |
| AXL |
Endogenous1 |
AXL |
NM_001699.4 |
1898-1997 |
CTGGAGGATTTCCTGAGTGAAGCGGTCTGCATGAAGGAATTTGACCATCCCAACGTCATGAGGCTCATCGGTGTCTGTTTCCAGGGTTCTGAACGAGAGA |
| B2M |
Endogenous1 |
B2M |
NM_004048.2 |
26-125 |
CGGGCATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGCCTTAGCTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATCCA |
| BAG1 |
Endogenous1 |
BAG1 |
NM_004323.3 |
541-640 |
CTTCATGTTACCTCCCAGCAGGGCAGCAGTGAACCAGTTGTCCAAGACCTGGCCCAGGTTGTTGAAGAGGTCATAGGGGTTCCACAGTCTTTTCAGAAAC |
| BCL2 |
Endogenous1 |
BCL2 |
NM_000633.2 |
1526-1625 |
CCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACG |
| BIRC5 |
Endogenous1 |
BIRC5 |
NM_001168.2 |
1216-1315 |
CCATTCTAAGTCATTGGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTTGCCACTGCT |
| BLVRA |
Endogenous1 |
BLVRA |
NM_000712.3 |
486-585 |
TTCCTGAAAAAAGAAGTGGTGGGGAAAGACCTGCTGAAAGGGTCGCTCCTCTTCACAGCTGGCCCGTTGGAAGAAGAGCGGTTTGGCTTCCCTGCATTCA |
| CAV1 |
Endogenous1 |
CAV1 |
NM_001753.3 |
435-534 |
AACCGCGACCCTAAACACCTCAACGATGACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTTGACGGCATTTGGA |
| CCNB1 |
Endogenous1 |
CCNB1 |
NM_031966.2 |
711-810 |
GAGACAACTTGAGGAAGAGCAAGCAGTCAGACCAAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAG |
| CCNE1 |
Endogenous1 |
CCNE1 |
NM_001238.1 |
1156-1255 |
GAGAACTGTGTCAAGTGGATGGTTCCATTTGCCATGGTTATAAGGGAGACGGGGAGCTCAAAACTGAAGCACTTCAGGGGCGTCGCTGATGAAGATGCAC |
| CD24 |
Endogenous1 |
CD24 |
NM_013230.2 |
96-195 |
ACCGACGGAGGGGACATGGGCAGAGCAATGGTGGCCAGGCTCGGGCTGGGGCTGCTGCTGCTGGCACTGCTCCTACCCACGCAGATTTATTCCAGTGAAA |
| CD68 |
Endogenous1 |
CD68 |
NM_001251.2 |
1141-1240 |
ACCGGTCCATCTTGCTGCCTCTCATCATCGGCCTGATCCTTCTTGGCCTCCTCGCCCTGGTGCTTATTGCTTTCTGCATCATCCGGAGACGCCCATCCGC |
| CDC20 |
Endogenous1 |
CDC20 |
NM_001255.1 |
916-1015 |
CCCGAGTGGGCTCCCTAAGCTGGAACAGCTATATCCTGTCCAGTGGTTCACGTTCTGGCCACATCCACCACCATGATGTTCGGGTAGCAGAACACCATGT |
Total number of rows: 164
Table truncated, full table size 20 Kbytes.
| Supplementary data files not provided |
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