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Platform GPL3444 Query DataSets for GPL3444
Status Public on Feb 18, 2006
Title Ambion Human_Mouse_Rat mirVana miRNA Bioarray_1566V1
Technology type spotted oligonucleotide
Distribution commercial
Organisms Homo sapiens; Mus musculus; Rattus norvegicus
Manufacturer Ambion Inc.
Manufacture protocol CodeLink(tm) Activated Slides are designed to covalently immobilize amine-modified DNA for microarrays. They are easy to use and are compatible with most available arraying and scanning instruments. CodeLink Activated Slides are coated with a novel 3-D surface chemistry comprised of a long-chain, hydrophilic polymer containing amine-reactive groups. This polymer is covalently crosslinked to itself and to the surface of the slide. The crosslinked polymer, combined with end-point attachment, orients the immobilized DNA, and holds it away from the surface of the slide.

Technical specifications:
Slide dimensions: 25 × 75 × 1 mm
1× Printing buffer: 50 mM sodium phosphate at pH 8.5

Codelink slides are manufacured by SurModics and were formally sold as 3D-Link(tm) Activated Slides.
Catalog number 1566V1
 
Description Manufactured using GE Healthcare’s CodeLink (TM) 3-D Gel Matrix Technology
Surface type: non-adsorptive
Attachment: covalent
The mirVana miRNA Bioarrays are an Ambion product that is manufactured by GE Healthcare and incorporates the CodeLink™ 3-D Gel Matrix slide surface. This aqueous environment elevates the probes away from the surface of the slide, allowing for maximum interaction between the probes and targets.
 
Web link http://www.ambion.com/catalog/CatNum.php?1566V1
Submission date Feb 10, 2006
Last update date Jul 13, 2007
Contact name Lakshmi V. Madabusi
E-mail(s) lmadabusi@ambion.com
Organization name Ambion Inc
Department Ambion Services
Street address 2130 Woodward St
City Austin
State/province TX
ZIP/Postal code 78748
Country USA
 
Samples (71) GSM210127, GSM210128, GSM210129, GSM210130, GSM210131, GSM210132 
Series (7)
GSE8467 Micro-RNAs in Adult Rat Liver are Refractory to 19 Hours Dioxin Exposure
GSE8474 MicroRNAs in adult rodent liver and response to dioxin
GSE12696 Apoptotic bodies unleash functional CXCL12 expression through microRNA-126

Data table header descriptions
ID Ambion probe ID plus spot replicate number
OLIGO_ID Oligo identifier
GENE miRBase miRNA Gene Name or the name of the control on the array.
DESCRIPTION Gene Description refers to Human, Mouse, and Rat Sanger's mirBase registry names, respectively; http://microrna.sanger.ac.uk
SEQUENCE Sequence of mature miRNA
ORF Entrez Gene Name
SPOT_ID spot identifier

Data table
ID OLIGO_ID GENE DESCRIPTION SEQUENCE ORF SPOT_ID
BA10001_01 BA10001 Control_1:BA10001
EMPTY_01 EMPTY
EMPTY_02 EMPTY
EMPTY_03 EMPTY
BA10001_02 BA10001 Control_1:BA10001
EMPTY_04 EMPTY
EMPTY_05 EMPTY
EMPTY_06 EMPTY
BA10001_03 BA10001 Control_1:BA10001
EMPTY_07 EMPTY
EMPTY_08 EMPTY
EMPTY_09 EMPTY
BA10001_04 BA10001 Control_1:BA10001
EMPTY_10 EMPTY
EMPTY_11 EMPTY
EMPTY_12 EMPTY
BA10001_05 BA10001 Control_1:BA10001
EMPTY_13 EMPTY
EMPTY_14 EMPTY
EMPTY_15 EMPTY

Total number of rows: 897

Table truncated, full table size 69 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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