GEO help: Mouse over screen elements for information.
Status
Public on Apr 01, 2009
Title
Yeast two-species array for S.cerevisiae and S.paradoxus (2 X 105K)
Technology type
in situ oligonucleotide
Distribution
non-commercial
Organisms
Saccharomyces cerevisiae ; Saccharomyces paradoxus Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Contributor(s)
Tirosh I Submission date
Feb 04, 2009
Last update date
Apr 01, 2009
Contact name
Itay Tirosh
E-mail(s)
itay.tirosh@weizmann.ac.il Organization name
Weizmann Institute of Science
Department
Molecular genetics
Lab
Naama Barkai
Street address
herzl
City
Rehovot
ZIP/Postal code
76100
Country
Israel
Samples (56)
GSM367220 , GSM367221 , GSM367222 , GSM367223 , GSM367224 , GSM367225
GSM367226 ,
GSM367227 ,
GSM367228 ,
GSM367229 ,
GSM367230 ,
GSM367231 ,
GSM367232 ,
GSM367233 ,
GSM367234 ,
GSM367235 ,
GSM367236 ,
GSM367237 ,
GSM367238 ,
GSM367239 ,
GSM588474 ,
GSM588475 ,
GSM588476 ,
GSM588477 ,
GSM588478 ,
GSM588479 ,
GSM588480 ,
GSM588481 ,
GSM588482 ,
GSM588483 ,
GSM588484 ,
GSM588485 ,
GSM588486 ,
GSM588487 ,
GSM588488 ,
GSM588489 ,
GSM588490 ,
GSM588491 ,
GSM588492 ,
GSM588493 ,
GSM588494 ,
GSM588495 ,
GSM588496 ,
GSM588497 ,
GSM588498 ,
GSM588499 ,
GSM588500 ,
GSM588501 ,
GSM588502 ,
GSM588503 ,
GSM588504 ,
GSM588505 ,
GSM588506 ,
GSM588507 ,
GSM588508 ,
GSM588509 Series (2)
GSE14708 Comparative analysis of gene expression in two yeast species and their interspecific hybrid
GSE23866 Chromatin regulators as capacitors of inter-species expression variations
Data table header descriptions ID Unique identifier of the probe defined as species_gene_position, where 'species' indicate if it is a probe for S.cerevisiae(1) or for S.paradoxus(2), gene is an index for the gene represented by the probe, position is the position of the probe sequence within the respective gene
ORGANISM ORF Name of the S.cerevisiae ORF
SEQUENCE Probe sequence
species_similarity percentage of identical base-pairs in the alignment of the this probe and the corresponding orthologous probe for the other yeast species
SPOT_ID S. cerevisiae ortholog for S. paradoxus ORF
Data table ID ORGANISM ORF SEQUENCE species_similarity SPOT_ID 1_1_2678
Saccharomyces cerevisiae
YAL001C AATTCTCAGACAAAATTGAATACAGCAAGGAAGTCTGCTGTCAAAGTTCCACTGGGCAAA
0.78333
2_1_2678
Saccharomyces paradoxus
AAATCTCAGAGAAAGTGGAATACACCAAAAAATTCGGCTGTCAAGATCCCACTTGGCAAA
0.78333
S. cerevisiae YAL001C ortholog
1_1_2836
Saccharomyces cerevisiae
YAL001C AGGGATAACATTGAGTAGATTGCAATCTAGGTGTCGTGAAGTACTTTCGCTTCATGAAAT
0.85
2_1_2836
Saccharomyces paradoxus
GATAACGTTAAGTAGACTGCAATTTAGATGCCATGAAGTGCTTTCGCTCCATGAAATATC
0.85
S. cerevisiae YAL001C ortholog
1_1_2587
Saccharomyces cerevisiae
YAL001C AATTCCAATGGTGAGAAATGTTCGACCTTTAACGTATACTTCAAGGAGATTTGAAATACG
0.85
2_1_2587
Saccharomyces paradoxus
ATTCCAATGATGAGGAACGTTCGGCCATTAACTTATACCTCAAGAAGATTTGAAATAAGA
0.85
S. cerevisiae YAL001C ortholog
1_1_2077
Saccharomyces cerevisiae
YAL001C AAATTTACTCTGGTACGTGATGACACACTTACACATTCTGGCAACGATCTGGCCATGTCT
0.81967
2_1_2077
Saccharomyces paradoxus
ATAGGAAAAGATTCACTTTGGTCCGTGACGATACATTACCACATTCTACCAATGATCTGG
0.81967
S. cerevisiae YAL001C ortholog
1_2_906
Saccharomyces cerevisiae
YAL002W AGACTTAATCATCATGTTAAATCCTACTACGCTTGATGTTGATCTTGCCGTCAAACTATG
0.78333
2_2_906
Saccharomyces paradoxus
TGAGGACTTGATTATTATGCTAGATCCTGCTACACTAGATGTGGATCTAGCTGTCAAATT
0.78333
S. cerevisiae YAL002W ortholog
1_2_1164
Saccharomyces cerevisiae
YAL002W ACAAAACTTGTCTATATCACCAAGTGATAAATGCTCCAAAATACAAAGGGAACTTTCAGC
0.8
2_2_1164
Saccharomyces paradoxus
AGAACTTGTCCATATCTCCCAGTAGTAAATGCATTGAAATACAAAGAGAACTCTCAGCAT
0.8
S. cerevisiae YAL002W ortholog
1_2_1932
Saccharomyces cerevisiae
YAL002W CTCAAGGATCGGTATCGAAAAATGCGTCACAATTTTTTCTGACTTTGACTATAATCTTCA
0.81667
2_2_1932
Saccharomyces paradoxus
GAACTTCTTCTTTTAAGGATTGGTATCGAGAAATGTGTGACGATTTTCTCTAACTTTGAC
0.81667
S. cerevisiae YAL002W ortholog
1_2_1404
Saccharomyces cerevisiae
YAL002W CAATGACATGGTTGCATCAGTTGGAGAAGCAGAATTGGTAAGTAGGCAATATGTTATTGA
0.78333
2_2_1404
Saccharomyces paradoxus
AATGATATGGTTACGTCAGCTGAAGGGCCTGAATCGATCAGTAGGCAATATGTTACTGAC
0.78333
S. cerevisiae YAL002W ortholog
1_6_545
Saccharomyces cerevisiae
YAL007C CTTGGTTATCTATATTGATTATCATTATCATTGCCGTTATAAGTATTGCCCAAGTTCTAC
0.86667
2_6_545
Saccharomyces paradoxus
TTGGTTATCTATACTAATCATGATCATCATCGCCGTTATAAGTATCGCCCAAGTCCTACT
0.86667
S. cerevisiae YAL007C ortholog
1_6_375
Saccharomyces cerevisiae
YAL007C AACTTTGACTGACGAGCATGAAGCTGATGTCAATAACGATGACATTATTGCCAATAACGC
0.88333
2_6_375
Saccharomyces paradoxus
TTTGACTGACGAACCTGAAGCTGATGTTAATAGTGATGATATTATCGCCAATAACGCCGT
0.88333
S. cerevisiae YAL007C ortholog
33648 4083 Kbytes .Supplementary data files not provided
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