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| Status |
Public on Sep 30, 2017 |
| Title |
Regulation of gene expression by FOXC1 in mouse mammary epithelial cells. |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The FOXC1 transcription factor plays a critical role in basal-like breast cancer development and metastasis. However, it is not clear whether its overexpression alters normal mammary development and mammary cell function in vivo. We used MMTV-FOXC1 transgenic mice to adddress this question. In association with the lobuloalveologenesis and lactation-related phenotype in the transgenic mice, we also found marked gene expression changes in mammary epithelial cells of the transgenic mice compared with wildtype mice at the lactation stage. Differentially expressed genes identified by RNA-Seq analysis include those involved in fatty acid metabolism, PPAR, cytokine, chemokine, inflammation, and NF-κB signaling. These data suggest that FOXC1 is an important regulator of mammary cell function.
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| Overall design |
Comparison of gene expression profiles in mammamry epithelial cells from MMTV-FOXC1 transgenic and wildtype mice at the lactation stage.
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| Contributor(s) |
Gao B, Deng N, Cui X |
| Citation(s) |
29070831 |
| Submission date |
Sep 29, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Xiaojiang Cui |
| E-mail(s) |
bowen.gao@cshs.org
|
| Phone |
3104237437
|
| Organization name |
Cedars Sinai Medical Center
|
| Department |
Surgery Dept
|
| Lab |
Breast Cancer Research Lab
|
| Street address |
3884 Fredonia Dr#F
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90068 |
| Country |
USA |
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| Platforms (1) |
| GPL21493 |
Illumina HiSeq 3000 (Mus musculus) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA412641 |
| SRA |
SRP119154 |
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