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| Status |
Public on Dec 04, 2017 |
| Title |
BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Allelic Gene Expression in Anolis carolinensis, bulk tissue RNA-seq) |
| Organism |
Anolis carolinensis |
| Experiment type |
Expression profiling by high throughput sequencing
Other
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| Summary |
In order to rule out the presence of imprinted X inactivation in A. carolinensis females we generated RNA-seq data from brain, heart, kidney, liver, ovary and genome sequence data from kidney.
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| Overall design |
Call of heterozygous SNPs of exonic regions in genomic DNA (kidney); call of expressed (allelic) SNPs from brain, heart, kidney, liver, and ovary of the same specimen.
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| Contributor(s) |
Kaessmann H, Cortez D, Lamanna F, Pradeepa M |
| Citation missing |
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| BioProject |
PRJNA381064 |
| Submission date |
Dec 01, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Diego Cortez |
| E-mail(s) |
diegoclaudio.cortezquezada@unil.ch
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| Organization name |
Univerity of Lausanne - CIG
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| Street address |
Rue de Lausanne
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| City |
Lausanne |
| ZIP/Postal code |
1015 |
| Country |
Switzerland |
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| Platforms (2) |
| GPL15001 |
Illumina HiSeq 2000 (Anolis carolinensis) |
| GPL23252 |
Illumina HiSeq 2500 (Anolis carolinensis) |
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| Samples (15)
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