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Series GSE108286 Query DataSets for GSE108286
Status Public on Feb 07, 2018
Title miRNA sequencing on triple negative breast cancer cell lines
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary This study consists of miRNA seq data of 26 triple negative breast cancer cell lines
 
Overall design We cultured and sequenced 26 TNBC cell lines (BT20, BT549, CAL120, CAL148, CAL51, DU4475, HCC1143, HCC1187, HCC1395, HCC1599, HCC1806, HCC1937, HCC38, HCC70, HDQP1, HS578T, MDAMB157, MDAMB231, MDAMB436, MDAMB453, MDAMB468, MFM223, SUM159, SUM185, SW527) in order to describe the small RNA landscape of these cell lines.
 
Contributor(s) Lehmann B, Guo Y
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 19, 2017
Last update date Dec 23, 2018
Contact name Yan Guo
E-mail(s) yanguo1978@gmail.com
Organization name Vanderbilt Cancer Center
Street address 639 Preston Research Bld
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
 
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (26)
GSM2894765 BT20
GSM2894766 BT549
GSM2894767 CAL120
Relations
BioProject PRJNA423034
SRA SRP127052

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108286_miRNA_cleaned.csv.gz 48.9 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record
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