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Series GSE10898 Query DataSets for GSE10898
Status Public on Apr 16, 2008
Title Transcriptome architecture across tissues in the pig
Organism Sus scrofa
Experiment type Expression profiling by array
Summary Artificial selection has resulted in animal breeds with extreme phenotypes. As an organism is made up of many different tissues and organs, each with its own genetic programme, it is pertinent to ask what are the relative contributions of breed or sex when assessed across tissues.
Are all tissues equally affected by breed or sex? How relevant is tissue in terms of total transcriptome variability?
Keywords: breeds, sex and tissues comparison
 
Overall design In order to gain insight on these issues, we have microarrayed 16 different tissues hybridization on Affymetrix microarrays from four animals of the extreme pig breeds Large White and Iberian, two males and two females
 
Contributor(s) Ferraz AL, Ojeda A, López-Béjar M, Fernandes LT, Castelló A, Folch JM, Pérez-Enciso M
Citation(s) 18416811
Submission date Mar 19, 2008
Last update date May 03, 2013
Contact name Miguel Perez-Enciso
E-mail(s) miguel.perez@uab.es
Phone +34935814225
URL http://www.icrea.es
Organization name Universitat Autonoma Barcelona
Department Animal Science
Lab Animal Breeding
Street address Veterinary School
City Bellaterra
ZIP/Postal code 08193
Country Spain
 
Platforms (1)
GPL3533 [Porcine] Affymetrix Porcine Genome Array
Samples (64)
GSM276241 Olfactory bulb; Large Wite; Male (OLFB_LW_M)
GSM276242 Olfactory bulb; Large Wite; Female (OLFB_LW_F)
GSM276243 Olfactory bulb; Iberian; Female (OLFB_IB_F)
Relations
BioProject PRJNA107301

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10898_RAW.tar 116.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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