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Series GSE112448 Query DataSets for GSE112448
Status Public on Apr 01, 2019
Title Polarized B -cell functions
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we designed an in vitro approach to help us understand how extracellular components participate in human B cell functional plasticity and how this network might be involved in auto-immune diseases. Two activated T cell subsets were used to expose a common pool of B cells to distinct, controlled microenvironments. We showed that the same B cell population could experience two possible opposite evolutions, to either helper or suppressor functions, in a flexible manner. These cells were thus referred to as effector B cells (Eff B) or suppressor B cells (Supp B). We thus analyzed their different transcriptional programs by RNA sequencing.
 
Overall design B cells cultured with memory or naive T cells were analyzed by RNA sequencing
 
Contributor(s) Simon Q, Grasseau A, Hillion S
Citation(s) 35359922
Submission date Mar 28, 2018
Last update date Apr 07, 2022
Contact name Sophie Hillion
E-mail(s) sophie.hillion@univ-brest.fr
Phone 33298223384
Organization name INSERM U1227
Lab Immunology
Street address Felix le Dantec
City Brest
ZIP/Postal code 29609
Country France
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM3070304 effector B cells 1
GSM3070305 effector B cells 2
GSM3070306 effector B cells 3
Relations
BioProject PRJNA446049
SRA SRP136642

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112448_RAW.tar 19.3 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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