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Series GSE113794 Query DataSets for GSE113794
Status Public on May 10, 2018
Title RNA sequencing of SRSF3 depleted pluripotent cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA seqeuncing was performed to identifiy changes in genes expression and alternative splicing following SRSF3 depletion in pluripotent stem cells.
 
Overall design Induced pluripotent stem cells (iPSCs) generated from reprogrammable conditional SRSF3 knockout (SRSF3-KO/OKSM) mouse embryonic fibroblasts (MEFs) were induced for 24h to deplete SRSF3 and RNA seqeuncing was performed.
 
Contributor(s) Anko M
Citation(s) 29741478
Submission date Apr 27, 2018
Last update date Jan 15, 2019
Contact name Minna-Liisa Anko
E-mail(s) minni.anko@monash.edu
Organization name Monash University
Department Department of Anatomy and Developmental Biology
Street address 15 Innovation Walk
City Clayton
State/province VIC
ZIP/Postal code 3800
Country Australia
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (4)
GSM3119500 Cre-negative control iPSC-1
GSM3119501 Cre-negative control iPSC-2
GSM3119502 Cre-positive SRSF3-KO-1
Relations
BioProject PRJNA454002
SRA SRP143519

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE113794_iPSC_DEG.csv.gz 1.3 Mb (ftp)(http) CSV
GSE113794_iPSC_MISO.xlsx 2.4 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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