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| Status |
Public on Jun 01, 2020 |
| Title |
Understanding microRNAs regulation in heat shock response in the sea cucumber Apostichopus japonicus |
| Organism |
Apostichopus japonicus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
In this study, we sought to determine the expression profiles of miRNAs under HS in A. japonicus by using HiSeq techinique. Nine miRNA libraries of sea cucumbers (Control: C1, C2, C3; HS 6h: 6h1, 6h2, 6h3; HS 48h: 48h1, 48h2, 48h3 ) were sequenced respectively. We highlighted differentially expressed miRNAs among HS groups, many of which were invovled of immunity process and disease regulation.
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| Overall design |
Nine miRNA libraries of sea cucumbers (Control: C1, C2, C3; HS 6h: 6h1, 6h2, 6h3; HS 48h: 48h1, 48h2, 48h3 ) were sequenced respectively. We highlighted differentially expressed miRNAs among HS groups, many of which were invovled of immunity process and disease regulation.
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| Contributor(s) |
Xu D |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
May 30, 2018 |
| Last update date |
Jun 01, 2020 |
| Contact name |
Dongxue Xu |
| E-mail(s) |
dongxuexu1989@126.com
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| Organization name |
Qingdao Agricultural University
|
| Street address |
Changcheng road No.700
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| City |
Qingdao |
| ZIP/Postal code |
266109 |
| Country |
China |
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| Platforms (1) |
| GPL23583 |
BGISEQ-500 (Apostichopus japonicus) |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA473675 |
| SRA |
SRP149319 |
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