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| Status |
Public on May 08, 2019 |
| Title |
Allelic specificity of IGH-DUX4 translocation in acute lymphoblastic leukemia (ALL) [Capture-C] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
In Nalm6, mono-allelic interaction between IGH enhancer and IGH promoter was found from Capture-C data.
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| Overall design |
Capture-C
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| Contributor(s) |
Tian L, Shao Y, Xu B, Ma X, Li Y, Ju B, Newman S, Zhou X, Tseng E, Hon T, Ashby M, Easton J, Zhang J |
| Citation(s) |
31243274 |
| Submission date |
Jun 07, 2018 |
| Last update date |
Aug 10, 2019 |
| Contact name |
Jinghui Zhang |
| Organization name |
St. Jude Children's Research Hospital
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| Street address |
262 Danny Thomas PL, Mail stop 1135
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| City |
Memphis |
| State/province |
TN |
| ZIP/Postal code |
38105 |
| Country |
USA |
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| Platforms (1) |
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| Samples (1) |
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| This SubSeries is part of SuperSeries: |
| GSE115494 |
Allelic specificity of IGH-DUX4 translocation in acute lymphoblastic leukemia (ALL) |
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| Relations |
| BioProject |
PRJNA475159 |
| SRA |
SRP150026 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE115493_RAW.tar |
6.6 Mb |
(http)(custom) |
TAR (of BW) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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