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Series GSE119812 Query DataSets for GSE119812
Status Public on Sep 12, 2018
Title Seh1 Interacts with Olig2 and Brd7 to Promote Oligodendrocyte Differentiation and Myelination (RNA-Seq)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Nuclear pore complex components (Nups) are involved in neural development and alterations in Nup genes are linked to human neurological diseases. However, the physiological functions of specific Nups and the underlying mechanisms involved in these processes remain elusive. Here we show that tissue-specific depletion of nucleoporin Seh1 causes dramatic myelination defects in the Central Nervous System (CNS). Seh1-deficient Oligodendrocyte Progenitor Cells (OPCs) proliferate properly, but fail to differentiate into mature oligodendrocytes, which impairs myelin production and remyelination after demyelinating injury. Genome-wide analyses show that Seh1 regulates a core myelinogenic regulatory network and depletion of Seh1 alters open chromatin configurations at its target genes. Mechanistically, Seh1 regulates OPCs differentiation by assembling Olig2 and Brd7 into a transcription complex at nuclear pores. Together, our results reveal that Seh1 is required for oligodendrocyte differentiation and myelination by promoting assembly of an Olig2-dependent transcription complex and expose nucleoporins as key players in the CNS.
 
Overall design RNA-seq was performed on mouse control or Seh1cKO immature oligodendrocytes(T3 D2).
 
Contributor(s) Zhang L, Liu Z
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Submission date Sep 11, 2018
Last update date Feb 11, 2019
Contact name Liu Zhixiong
E-mail(s) 2452503371@qq.com
Phone 8615160067720
Organization name Xiamen University
Department School of Life Sciences
Lab State Key Laboratory for Cellular Stress Biology, Innovation Center for Cell Signaling Network
Street address Xiangan Nanlu 4221-120
City xiamen
State/province Fujian
ZIP/Postal code 361102
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (2)
GSM3384401 control
GSM3384402 Seh1cKO
This SubSeries is part of SuperSeries:
GSE119816 Seh1 Interacts with Olig2 and Brd7 to Promote Oligodendrocyte Differentiation and Myelination
Relations
BioProject PRJNA490360
SRA SRP161506

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119812_DEG_list_for_comparison_control_vs_Seh1cKO.txt.gz 25.5 Kb (ftp)(http) TXT
GSE119812_RAW.tar 3.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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