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Series GSE122141 Query DataSets for GSE122141
Status Public on Nov 15, 2018
Title Avermectin treatment for Lepeophtheirus salmonis: Impacts on host (Salmo salar) and parasite immunophysiology
Organism Lepeophtheirus salmonis
Experiment type Expression profiling by array
Summary This study investigates the transcriptomic responses of salmon lice (L. salmonis) infecting salmon treated with emamectin benzoate (either 1x or 3x), ivermectin, or commercial feed controls
 
Overall design Copepodid-staged larvae of L. salmonis were used to infect Atlantic salmon fed 1x or 3x emamectin benzoate, ivermectin, or commercial feed controls. Pre-adult I lice were collected from each group, pooled by treatment group and sex (pools of 6 lice) and stored at -80C for RNA extraction and microarray analyses. A total of 48 pools were used (n = 6 per condition except n = 5 for male controls and n = 7 for male 3xEMB)
 
Contributor(s) Whyte SK, Poley JD, Mueller A, VanIderstine C, Fitzpatrick KE, Purcell SL, Koop BF, Johnson SC, Wadsworth SL, Fast MD
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Submission date Nov 05, 2018
Last update date Nov 16, 2018
Contact name Ben F Koop
E-mail(s) bkoop@uvic.ca
Phone (250) 472-4067
Organization name The University of Victoria
Department Biology
Lab Centre for Biomedical Research
Street address PO Box 3020 STN CSC
City Victoria
State/province BC
ZIP/Postal code V8W 3N5
Country Canada
 
Platforms (1)
GPL15566 GiLS Lepeophtheirus salmonis
Samples (48)
GSM3455981 Male_3xEMB (10107.1_Block1.txt)
GSM3455982 Male_Ivermectin (10107.2_Block2.txt)
GSM3455983 Female_1xEMB (10107.3_Block3.txt)
Relations
BioProject PRJNA505482

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122141_RAW.tar 443.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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