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Series GSE126146 Query DataSets for GSE126146
Status Public on Dec 26, 2019
Title RNA-sequencing analysis to investigate genes regulated by CASZ1 in RD cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In this study we identified genes regulated by CASZ1b in RD cells
 
Overall design In CASZ1b stably transfected RD cells (RDtetCASZ1b), CASZ1b is tetracycline inducible . RNA was isolated from RDtetCASZ1b cells that treated with or without tetracycline (Tet) for 48 hr
 
Contributor(s) Liu Z, Thiele CJ
Citation(s) 32060262
Submission date Feb 06, 2019
Last update date Mar 02, 2020
Contact name Jack Shern
Organization name NCI
Lab POB
Street address 10 Center drive
City bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM3592312 RDtetCASZ1b_Ctrl-Rep1
GSM3592313 RDtetCASZ1b_Ctrl-Rep2
GSM3592314 RDtetCASZ1b_Ctrl-Rep3
This SubSeries is part of SuperSeries:
GSE126147 CASZ1 directly regulates expression of myogenic genes through regional epigenetic modifications to induce muscle and rhabdomyosarcoma cell differentiation
Relations
BioProject PRJNA521141
SRA SRP184202

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126146_RNA-seq_RDtetCASZ1b_Tet_vs_Ctrl_CPM.txt.gz 1.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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