NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE13139 Query DataSets for GSE13139
Status Public on Oct 07, 2009
Title LOX-1-dependent transcriptional regulation after oxidized LDL (OxLDL) treatment of human aortic endothelial cells.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary LOX-1 is the primary endothelial receptor for oxidized LDL in endothelial cells and plays a role in the development of atherosclerosis. Expression profiling was carried out on samples from HAECT cells over-expressing either LOX-1 or GFP control and treated with or without OxLDL over a time course of 2, 6, 12 and 24 Hours. The goal of the study was to identify genes expression changes activated by OxLDL binding to LOX-1 at several different time points.
 
Overall design This series of samples is derived from HAECT cells, and for both GFP and LOX-1 overexpressing cells includes; 0 Hr untreated (n=3), 2 Hr untreated (n=3), 2Hr OxLDL treated (n=3), 6 Hr untreated (n=3), 6 Hr OxLDL treated (n=3), 12 Hr untreated (n=3), 12 Hr OxLDL treated (n=3), 24 Hr untreated (n=3), 24 Hr OxLDL treated (n=3). For data analysis, it was assumed that 0 Hr oxLDL treatment condition (not measured) was equivalent to the 0 Hr untreated condition.
 
Contributor(s) Mattaliano MD, Huard C, Cao W, Hill AA, Zhong W, Martinez RV, Harnish DC, Paulsen JE, Shih HH
Citation(s) 19279231
Submission date Oct 09, 2008
Last update date Mar 25, 2019
Contact name Andrew Hill
E-mail(s) andrew.hill@pfizer.com
Phone 617-674-6341
Organization name Pfizer
Department Research Business Technology
Street address 300 Technology Square
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (54)
GSM329055 GFP oxLDL 6hr 282295643
GSM329056 GFP 0hr 282295433
GSM329057 LOX1 oxLDL 12hr 282295823
Relations
BioProject PRJNA109569

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13139_RAW.tar 419.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap