|
| Status |
Public on Apr 13, 2020 |
| Title |
RNAseq analysis of prostate cancer stem cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Prostate cancer stem cells were isolated from PC3 cells by fluorescence activated cell sorting using the SORE6 reporter system. Differential gene expression between cancer stem cells and non-cancer stem cells were determined by RNAseq analysis.
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| |
|
| Overall design |
mRNA profiles of PC3 cells were determined by deep sequencing, in duplicate, using the BGISEQ-500 platform (BGI). Each sample was sequenced at 100 bp paired-end read and the depth of 30M reads per sample
|
| |
|
| Contributor(s) |
Chen S |
| Citation(s) |
31500347 |
| Submission date |
Jul 17, 2019 |
| Last update date |
Apr 13, 2020 |
| Contact name |
Songhai Chen |
| E-mail(s) |
songhai-chen@uiowa.edu
|
| Phone |
3196219360
|
| Organization name |
University of Iowa
|
| Department |
Pharmacology
|
| Lab |
Songhai Chen
|
| Street address |
51 Newton Road, 2-250 BSB
|
| City |
Iowa City |
| State/province |
IOWA |
| ZIP/Postal code |
52242 |
| Country |
USA |
| |
|
| Platforms (1) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA555090 |
| SRA |
SRP215056 |
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