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Series GSE145117 Query DataSets for GSE145117
Status Public on Feb 07, 2021
Title RNA-seq profiles of brains of Qk-Rosa26-iCKO mice and control mice.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This study is to analyze the transcriptomic profiles of Rosa26-CreERT2;QkLoxP/LoxP (Qk-Rosa26-iCKO) mice and littermate controls to determine the differentially expressed genes after Qk deletion.
 
Overall design The Rosa26-CreERT2;QkLoxP/LoxP (Qk-Rosa26-iCKO) mice and littermate controls were injected with tamoxifen at postnatal day 1 and their brains were collected at postnatal day 7. Total RNA was extracted by RNeasy Mini Kit and used for sequencing with Illumina HiSeq 2000 Sequencer.
 
Contributor(s) Shingu T, Zhou X
Citation(s) 33942715
Submission date Feb 11, 2020
Last update date May 09, 2021
Contact name Jian Hu
E-mail(s) JHu3@mdanderson.org
Organization name The University of Texas MD Anderson Cancer Center
Department Department of Cancer Biology, Division of Basic Sciences
Street address 1881 East Rd
City Houston
State/province Texas
ZIP/Postal code 77054
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM4306724 brain, Control rep 1
GSM4306725 brain, Qk-Rosa26-iCKO rep 1
GSM4306726 brain, Control rep 2
Relations
BioProject PRJNA606064
SRA SRP248257

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145117_Project_JH_QK-NSC-KO-2_RNASeq_edgeR_20200211.xlsx 2.6 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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