NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE147122 Query DataSets for GSE147122
Status Public on Mar 22, 2021
Title Polysaccharide-based scaffolds for in situ hydrogelation: Use for next generation of bioartificial cardiac tissues
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In search for Matrigel substitutes, which is composed of proteins and glycans from mouse sarcoma, we disclose new dextran-derived functionalised hydrogels of different molecular weight suited as matrices in bioartificial cardiac tissue (BCT) cultivation. Moreover, the biopeptide RGD was coupled to the dextran polysaccharide backbone in order to modulate the bioactivity of the new matrices. Dextrans in combination with human collagen I, supported cardiac tissue formation with induced pluripotent stem cell-derived cardiomyocytes and fibroblasts. The strength and frequency of the formed heart muscles were monitored over time in a bioreactor. It was shown that covalently in situ cross linked dextrans are promising matrix systems for tissue formation in the field of regenerative medicine.
 
Overall design The transcriptome of two bioartificial cardiac tissue (BCT) groups with induced pluripotent stem cell-derived cardiomyocytes (iPSC-CM), prepared using human collagen I (hColI) and functionalised dextrane (Dex) with or without RGD (Dex-RGD), was compared to the differentiated CM source and undifferentiated iPSCs.
 
Contributor(s) Szepes M, Banerjee S, Dibbert N, Rios Camacho JC, Kirschning A, Gruh I, Dräger G
Citation(s) 33838803
Submission date Mar 17, 2020
Last update date Jun 21, 2021
Contact name Monika Szepes
Organization name Hannover Medical School
Department Department of Cardiac, Thoracic, Transplantation and Vascular Surgery
Lab Leibniz Research Laboratories for Biotechnology and Artificial Organs
Street address Carl-Neuberg Str. 1
City Hannover
ZIP/Postal code 30625
Country Germany
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (12)
GSM4417568 iPSC_1
GSM4417569 iPSC_2
GSM4417570 iPSC_3
Relations
BioProject PRJNA613062
SRA SRP253099

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147122_N1628-N1639_AllTreated_vs_AllControls_DESeq2_result.txt.gz 7.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap