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Series GSE153386 Query DataSets for GSE153386
Status Public on Jun 27, 2020
Title Next Generation Sequencing Based RNAseq Analysis of lri35-/- mutant zebrafish larvae at 5 dpf
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression profiles in lri35 mutant zebrafish larvae at 5 dpf based on RNAseq data.
 
Overall design Total RNA was isolated from homozygous lri35 mutant and their clutchmate wild-type larvae at 5 dpf. Gene expression difference between wild-type and lri35 mutant larvae was determined based on the RNAseq data.
 
Contributor(s) Sakaguchi T
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Submission date Jun 26, 2020
Last update date Jun 30, 2020
Contact name Takuya Sakaguchi
E-mail(s) sakagut2@ccf.org
Organization name Cleveland Clinic Foundation
Street address 9500 Euclid Ave.
City Cleveland
ZIP/Postal code 44120
Country USA
 
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (2)
GSM4643440 WT siblings
GSM4643441 lir35 mutant
Relations
BioProject PRJNA642221
SRA SRP269028

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153386_lri35_gene_expression_differences.csv.gz 1.1 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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