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GEO accession:
Series GSE164716
Query DataSets for GSE164716
Status
Public on Feb 15, 2022
Title
H3K27me3 conditions chemotolerance in triple-negative breast cancer
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
37340307
Submission date
Jan 12, 2021
Last update date
Sep 08, 2023
Contact name
CĂ©line Vallot
E-mail(s)
celine.vallot@curie.fr
Phone
0156246340
Organization name
Institut Curie
Street address
26 Rue D'Ulm
City
Paris
ZIP/Postal code
75005
Country
France
Platforms (1)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (100)
Less...
More...
GSM5008855
MM468_DMSO1_day60_H3K27me3 [scChIP-seq]
GSM5008856
MM468_DMSO3_day77_H3K27me3 [scChIP-seq]
GSM5008857
MM468_DMSO5_day131_H3K27me3 [scChIP-seq]
GSM5008858
MM468_5FU1_day33_H3K27me3 [scChIP-seq]
GSM5008859
MM468_5FU2_day67_H3K27me3 [scChIP-seq]
GSM5008860
MM468_5FU6_day131_H3K27me3 [scChIP-seq]
GSM5008861
MM468_5FU3_day147_H3K27me3 [scChIP-seq]
GSM5008862
MM468_5FU2_day171_H3K27me3 [scChIP-seq]
GSM5008863
MM468_DMSO1_day0_H3K4me3 [scChIP-seq]
GSM5008864
MM468_5FU1_day60_H3K4me3 [scChIP-seq]
GSM5008865
HBCx95_m43_UNT_H3K27me3 [scChIP-seq]
GSM5008866
HBCx95_m43_UNT_H3K4me3 [scChIP-seq]
GSM5009165
MM468_reChIP_H3K27me3_H3K4me3
GSM5009166
MM468_primaryH3K27me3_H3K27me3_H3K4me3
GSM5009167
MM468bc_reChIP_H3K27me3_IgG
GSM5009168
MM468bc_primaryH3K27me3_H3K27me3_IgG
GSM5009169
MM468_5FU4_day113_a_H3K27me3 [bulk ChIP-seq]
GSM5009170
MM468_5FU4_day113_b_H3K27me3 [bulk ChIP-seq]
GSM5009171
MM468_DMSO4_day113_a_H3K27me3 [bulk ChIP-seq]
GSM5009172
MM468_DMSO4_day113_b_H3K27me3 [bulk ChIP-seq]
GSM5009173
MM468_5FU3_day77_H3K27me3 [bulk ChIP-seq]
GSM5009174
MM468_DMSO3_day77_H3K27me3 [bulk ChIP-seq]
GSM5009175
MM468_5FU2_day67_H3K27me3 [bulk ChIP-seq]
GSM5009176
MM468_DMSO2_day67_H3K27me3 [bulk ChIP-seq]
GSM5009177
MM468_GSKJ4_day33_D02_H3K27me3
GSM5009178
MM468_DMSO_day33_E02_H3K27me3
GSM5009179
MM468_5FU_day33_F02_H3K27me3
GSM5009180
MM468_UNC_day33_A02_H3K27me3
GSM5009181
MM468_UNC_5FU_day33_C02_H3K27me3
GSM5017686
MM468_5FU3_day202 [scRNA-seq]
GSM5017687
MM468_5FU3_day50 [scRNA-seq]
GSM5017688
MM468_5FU3_day77 [scRNA-seq]
GSM5017689
MM468_5FU2_day171 [scRNA-seq]
GSM5017690
MM468_5FU2_day67 [scRNA-seq]
GSM5017691
MM468_5FU1_day214 [scRNA-seq]
GSM5017692
MM468_5FU1_day33 [scRNA-seq]
GSM5017693
MM468_5FU1_UNC_day33 [scRNA-seq]
GSM5017694
MM468_chemonaive [scRNA-seq]
GSM5017695
MM468_UNC_day33 [scRNA-seq]
GSM5017696
HBCx95_chemonaive [scRNA-seq]
GSM5017697
HBCx95_persister [scRNA-seq]
GSM5017698
HBCx95_recurrent [scRNA-seq]
GSM5017699
HBCx95_residual [scRNA-seq]
GSM5017700
HBCx95_resistant [scRNA-seq]
GSM5662564
HBCx39_chemonaive [scRNA-seq]
GSM5662565
HBCx39_persister [scRNA-seq]
GSM5662566
HBCx172_chemonaive [scRNA-seq]
GSM5662567
HBCx172_persister [scRNA-seq]
GSM5664458
HBCx172_primary_H3K4me3_H3K27me3
GSM5664459
HBCx172_primary_H3K4me3_IgG
GSM5664460
HBCx172_reChIP_H3K4me3_H3K27me3
GSM5664461
HBCx172_reChIP_H3K4me3_IgG
GSM5664462
HBCx39_primary_H3K4me3_H3K27me3
GSM5664463
HBCx39_primary_H3K4me3_IgG
GSM5664464
HBCx39_reChIP_H3K4me3_H3K27me3
GSM5664465
HBCx39_reChIP_H3K4me3_IgG
GSM5664466
HBCx95_primary_H3K4me3_H3K27me3
GSM5664467
HBCx95_primary_H3K4me3_IgG
GSM5664468
HBCx95_reChIP_H3K4me3_H3K27me3
GSM5664469
HBCx95_reChIP_H3K4me3_IgG
GSM5664470
HCC38_primary_H3K4me3_H3K27me3
GSM5664471
HCC38_primary_H3K4me3_IgG
GSM5664472
HCC38_reChIP_H3K4me3_H3K27me3
GSM5664473
HCC38_reChIP_H3K4me3_IgG
GSM5664474
MM468_primary_H3K4me3_H3K27me3
GSM5664475
MM468_primary_H3K4me3_IgG
GSM5664476
MM468_reChIP_H3K4me3_H3K27me3
GSM5664477
MM468_reChIP_H3K4me3_IgG
GSM5664478
BT20_primary_H3K4me3_IgG
GSM5664479
BT20_reChIP_H3K4me3_H3K27me3
GSM5664480
BT20_reChIP_H3K4me3_IgG
GSM5664481
patient_tumor_HBCx106_H3K27me3
GSM5664482
patient_tumor_HBCx106_H3K4me3
GSM5664483
patient_tumor_HBCx130_H3K27me3
GSM5664484
patient_tumor_HBCx130_H3K4me3
GSM5664485
patient_tumor_HBCx144_H3K27me3
GSM5664486
patient_tumor_HBCx144_H3K4me3
GSM5664487
patient_tumor_HBCx147_H3K27me3
GSM5664488
patient_tumor_HBCx147_H3K4me3
GSM5664489
patient_tumor_HBCx166_H3K27me3
GSM5664490
patient_tumor_HBCx166_H3K4me3
GSM5664491
patient_tumor_HBCx167_H3K27me3
GSM5664492
patient_tumor_HBCx167_H3K4me3
GSM5664493
patient_tumor_HBCx39_H3K27me3
GSM5664494
patient_tumor_HBCx39_H3K4me3
GSM5664495
patient_tumor_HBCx95_H3K27me3
GSM5664496
patient_tumor_HBCx95_H3K4me3
GSM5664497
patient_tumor_HBCx172_H3K27me3
GSM5664498
patient_tumor_HBCx172_H3K4me3
GSM5782059
MM468_GSKJ4_day91_H3K27me3 [scChIP-seq]
GSM5900252
MM468_initial_population
GSM5900253
MM468_5FU5_D171
GSM5900254
MM468_5FU3_D147
GSM5900255
MM468_5FU3_D50
GSM5900256
MM468_5FU6_D131
GSM5900257
MM468_5FU2_D153
GSM5900258
MM468_5FU2_D67
GSM5900259
MMA468_DMSO5_D171
GSM5900260
MM468_DMSO3_D147
GSM5900261
MM468_DMSO6_D131
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE164385
H3K27me3 conditions chemotolerance in triple-negative breast cancer [scChIP-seq]
GSE164409
H3K27me3 conditions chemotolerance in triple-negative breast cancer [ChIP-seq]
GSE164715
H3K27me3 conditions chemotolerance in triple-negative breast cancer [scRNA-seq]
GSE186965
H3K27me3 conditions chemotolerance in triple-negative breast cancer [ChIP-reChIP]
GSE186966
H3K27me3 conditions chemotolerance in triple-negative breast cancer [CUT&TAG]
GSE196764
H3K27me3 conditions chemotolerance in triple-negative breast cancer [WES]
Relations
BioProject
PRJNA691624
Download family
Format
SOFT formatted family file(s)
SOFT
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TXT
Supplementary file
Size
Download
File type/resource
GSE164716_RAW.tar
13.2 Gb
(http)
(custom)
TAR (of BW, MTX, TBI, TSV, VCF)
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