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Series GSE167093 Query DataSets for GSE167093
Status Public on Feb 20, 2021
Title Sexual dimorphism in cancer: insights from transcriptional signatures in kidney tissues and renal cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by array
Third-party reanalysis
Summary We have characterized genome-wide expression and regulatory networks of 609 renal tumors and 256 non-tumor renal tissues using the Illumina HumanHT-12 v4 Expression BeadChips.
Data show remarkable sexual dimorphism at transcriptional level including sex-specific signatures associated with RCC progression and survival.
 
Overall design Total RNA obtained from frozen RCC tumour and/or adjacent non-tumour renal tissue.
Note that 202 samples (from 101 patients) analyzed were already submitted (see PMID: 23526956 and GSE40435).
 
Contributor(s) Laskar RS, Hubert J, Chanudet E
Citation(s) 33527138
Submission date Feb 19, 2021
Last update date May 20, 2021
Contact name Jean-Noel Hubert
Organization name International Agency For Research on Cancer
Department Genetics
Street address 150 cours Albert Thomas
City Lyon
ZIP/Postal code 69008
Country France
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (656)
GSM5092664 patient 102, non-tumor tissue
GSM5092665 patient 102, RCC tumor tissue
GSM5092666 patient 103, non-tumor tissue
Relations
Reanalysis of GSM993983
Reanalysis of GSM993984
Reanalysis of GSM993985
Reanalysis of GSM993986
Reanalysis of GSM993987
Reanalysis of GSM993988
Reanalysis of GSM993989
Reanalysis of GSM993990
Reanalysis of GSM993991
Reanalysis of GSM993992
Reanalysis of GSM993993
Reanalysis of GSM993994
Reanalysis of GSM993995
Reanalysis of GSM993996
Reanalysis of GSM993997
Reanalysis of GSM993998
Reanalysis of GSM993999
Reanalysis of GSM994000
Reanalysis of GSM994001
Reanalysis of GSM994002
Reanalysis of GSM994003
Reanalysis of GSM994004
Reanalysis of GSM994005
Reanalysis of GSM994006
Reanalysis of GSM994007
Reanalysis of GSM994008
Reanalysis of GSM994009
Reanalysis of GSM994010
Reanalysis of GSM994011
Reanalysis of GSM994012
Reanalysis of GSM994013
Reanalysis of GSM994014
Reanalysis of GSM994015
Reanalysis of GSM994016
Reanalysis of GSM994017
Reanalysis of GSM994018
Reanalysis of GSM994019
Reanalysis of GSM994020
Reanalysis of GSM994021
Reanalysis of GSM994022
Reanalysis of GSM994023
Reanalysis of GSM994024
Reanalysis of GSM994025
Reanalysis of GSM994026
Reanalysis of GSM994027
Reanalysis of GSM994028
Reanalysis of GSM994029
Reanalysis of GSM994030
Reanalysis of GSM994031
Reanalysis of GSM994032
Reanalysis of GSM994033
Reanalysis of GSM994034
Reanalysis of GSM994035
Reanalysis of GSM994036
Reanalysis of GSM994037
Reanalysis of GSM994038
Reanalysis of GSM994039
Reanalysis of GSM994040
Reanalysis of GSM994041
Reanalysis of GSM994042
Reanalysis of GSM994043
Reanalysis of GSM994044
Reanalysis of GSM994045
Reanalysis of GSM994046
Reanalysis of GSM994047
Reanalysis of GSM994048
Reanalysis of GSM994049
Reanalysis of GSM994050
Reanalysis of GSM994051
Reanalysis of GSM994052
Reanalysis of GSM994053
Reanalysis of GSM994054
Reanalysis of GSM994055
Reanalysis of GSM994056
Reanalysis of GSM994057
Reanalysis of GSM994058
Reanalysis of GSM994059
Reanalysis of GSM994060
Reanalysis of GSM994061
Reanalysis of GSM994062
Reanalysis of GSM994063
Reanalysis of GSM994064
Reanalysis of GSM994065
Reanalysis of GSM994066
Reanalysis of GSM994067
Reanalysis of GSM994068
Reanalysis of GSM994069
Reanalysis of GSM994070
Reanalysis of GSM994071
Reanalysis of GSM994072
Reanalysis of GSM994073
Reanalysis of GSM994074
Reanalysis of GSM994075
Reanalysis of GSM994076
Reanalysis of GSM994077
Reanalysis of GSM994078
Reanalysis of GSM994079
Reanalysis of GSM994080
Reanalysis of GSM994081
Reanalysis of GSM994082
Reanalysis of GSM994083
Reanalysis of GSM994084
Reanalysis of GSM994085
Reanalysis of GSM994086
Reanalysis of GSM994087
Reanalysis of GSM994088
Reanalysis of GSM994089
Reanalysis of GSM994090
Reanalysis of GSM994091
Reanalysis of GSM994092
Reanalysis of GSM994093
Reanalysis of GSM994094
Reanalysis of GSM994095
Reanalysis of GSM994096
Reanalysis of GSM994097
Reanalysis of GSM994098
Reanalysis of GSM994099
Reanalysis of GSM994100
Reanalysis of GSM994101
Reanalysis of GSM994102
Reanalysis of GSM994103
Reanalysis of GSM994104
Reanalysis of GSM994105
Reanalysis of GSM994106
Reanalysis of GSM994107
Reanalysis of GSM994108
Reanalysis of GSM994109
Reanalysis of GSM994110
Reanalysis of GSM994111
Reanalysis of GSM994112
Reanalysis of GSM994113
Reanalysis of GSM994114
Reanalysis of GSM994115
Reanalysis of GSM994116
Reanalysis of GSM994117
Reanalysis of GSM994118
Reanalysis of GSM994119
Reanalysis of GSM994120
Reanalysis of GSM994121
Reanalysis of GSM994122
Reanalysis of GSM994123
Reanalysis of GSM994124
Reanalysis of GSM994125
Reanalysis of GSM994126
Reanalysis of GSM994127
Reanalysis of GSM994128
Reanalysis of GSM994129
Reanalysis of GSM994130
Reanalysis of GSM994131
Reanalysis of GSM994132
Reanalysis of GSM994133
Reanalysis of GSM994134
Reanalysis of GSM994135
Reanalysis of GSM994136
Reanalysis of GSM994137
Reanalysis of GSM994138
Reanalysis of GSM994139
Reanalysis of GSM994140
Reanalysis of GSM994141
Reanalysis of GSM994142
Reanalysis of GSM994143
Reanalysis of GSM994144
Reanalysis of GSM994145
Reanalysis of GSM994146
Reanalysis of GSM994147
Reanalysis of GSM994148
Reanalysis of GSM994149
Reanalysis of GSM994150
Reanalysis of GSM994151
Reanalysis of GSM994152
Reanalysis of GSM994153
Reanalysis of GSM994154
Reanalysis of GSM994155
Reanalysis of GSM994156
Reanalysis of GSM994157
Reanalysis of GSM994158
Reanalysis of GSM994159
Reanalysis of GSM994160
Reanalysis of GSM994161
Reanalysis of GSM994162
Reanalysis of GSM994163
Reanalysis of GSM994164
Reanalysis of GSM994165
Reanalysis of GSM994166
Reanalysis of GSM994167
Reanalysis of GSM994168
Reanalysis of GSM994169
Reanalysis of GSM994170
Reanalysis of GSM994171
Reanalysis of GSM994172
Reanalysis of GSM994173
Reanalysis of GSM994174
Reanalysis of GSM994175
Reanalysis of GSM994176
Reanalysis of GSM994177
Reanalysis of GSM994178
Reanalysis of GSM994179
Reanalysis of GSM994180
Reanalysis of GSM994181
Reanalysis of GSM994182
Reanalysis of GSM994183
Reanalysis of GSM994184
BioProject PRJNA702991

SampleSheet header descriptions
sample
GEO accession
title
tissue
type
sex
age
histo
stage
grade
raw data

Data table
sample GEO accession title tissue type sex age histo stage grade raw data
1NL GSM993983 patient 1, non-tumor tissue kidney normal male 62 conventional RCC 4 4 see PMID: 23526956 and GSE40435
1TU GSM993984 patient 1, RCC tumor tissue kidney tumor male 62 conventional RCC 4 4 see PMID: 23526956 and GSE40435
2NL GSM993985 patient 2, non-tumor tissue kidney normal female 75 conventional RCC 1 1 see PMID: 23526956 and GSE40435
2TU GSM993986 patient 2, RCC tumor tissue kidney tumor female 75 conventional RCC 1 1 see PMID: 23526956 and GSE40435
3NL GSM993987 patient 3, non-tumor tissue kidney normal male 76 conventional RCC 1 1 see PMID: 23526956 and GSE40435
3TU GSM993988 patient 3, RCC tumor tissue kidney tumor male 76 conventional RCC 1 1 see PMID: 23526956 and GSE40435
4NL GSM993989 patient 4, non-tumor tissue kidney normal male 46 conventional RCC 1 2 see PMID: 23526956 and GSE40435
4TU GSM993990 patient 4, RCC tumor tissue kidney tumor male 46 conventional RCC 1 2 see PMID: 23526956 and GSE40435
5NL GSM993991 patient 5, non-tumor tissue kidney normal male 62 conventional RCC 1 1 see PMID: 23526956 and GSE40435
5TU GSM993992 patient 5, RCC tumor tissue kidney tumor male 62 conventional RCC 1 1 see PMID: 23526956 and GSE40435
6NL GSM993993 patient 6, non-tumor tissue kidney normal male 54 conventional RCC 3 2 see PMID: 23526956 and GSE40435
6TU GSM993994 patient 6, RCC tumor tissue kidney tumor male 54 conventional RCC 3 2 see PMID: 23526956 and GSE40435
7NL GSM993995 patient 7, non-tumor tissue kidney normal female 59 conventional RCC 1 2 see PMID: 23526956 and GSE40435
7TU GSM993996 patient 7, RCC tumor tissue kidney tumor female 59 conventional RCC 1 2 see PMID: 23526956 and GSE40435
8NL GSM993997 patient 8, non-tumor tissue kidney normal male 49 conventional RCC 1 2 see PMID: 23526956 and GSE40435
8TU GSM993998 patient 8, RCC tumor tissue kidney tumor male 49 conventional RCC 1 2 see PMID: 23526956 and GSE40435
9NL GSM993999 patient 9, non-tumor tissue kidney normal female 76 conventional RCC 1 1 see PMID: 23526956 and GSE40435
9TU GSM994000 patient 9, RCC tumor tissue kidney tumor female 76 conventional RCC 1 1 see PMID: 23526956 and GSE40435
10TU GSM994002 patient 10, non-tumor tissue kidney normal male 58 conventional RCC 1 3 see PMID: 23526956 and GSE40435
10NL GSM994001 patient 10, RCC tumor tissue kidney tumor male 58 conventional RCC 1 3 see PMID: 23526956 and GSE40435

Total number of rows: 858

Table truncated, full table size 114 Kbytes.




Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE167093_Pairs_normalization_matrix.xlsx 115.1 Mb (ftp)(http) XLSX
GSE167093_RAW.tar 26.2 Mb (http)(custom) TAR
GSE167093_Tumor_only_norm_matrix.xlsx 138.7 Mb (ftp)(http) XLSX
GSE167093_non_norm_matrix1.txt.gz 43.0 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix10.txt.gz 6.2 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix11.txt.gz 5.3 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix12.txt.gz 4.7 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix13.txt.gz 15.2 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix2.txt.gz 5.7 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix3.txt.gz 4.7 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix4.txt.gz 6.2 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix5.txt.gz 4.7 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix6.txt.gz 3.8 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix7.txt.gz 4.0 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix8.txt.gz 4.7 Mb (ftp)(http) TXT
GSE167093_non_norm_matrix9.txt.gz 5.5 Mb (ftp)(http) TXT
Processed data are available on Series record

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