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Series GSE171989 Query DataSets for GSE171989
Status Public on Apr 14, 2021
Title Platelets orchestrate the resolution of pulmonary inflammation in mice through Treg repositioning and macrophage education
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Our study investigates how interactions of platelets with regulatory T cells (Tregs) modulates the transcriptomic profile of Tregs and pro- and anti-inflammatory macrophages in the lung during resolution of pulmonary inflammation.
 
Overall design Pulmonary inflammation was induced by bacterial pneumonia (K. pneumonia) in mice. Single Tregs and Treg-PLT aggregates were isolated from the brochoalveolar lavage (BAL) on day 5 after induction of pneumonia. Pro- and antiinflammatory macrophages were isolated from the BAL on day 5 after induction of bacterial pneumonia from control and platelet-depleted mice.
 
Contributor(s) Rossaint J, Tekath T
Citation(s) 34014253
Submission date Apr 13, 2021
Last update date Jul 14, 2021
Contact name Jan Rossaint
E-mail(s) jan@rossaint.net
Organization name University of Münster
Department Dpt. of Anesthesiology
Street address Albert-Schweitzer-Campus 1, Bldg. A1
City Münster
ZIP/Postal code 48149
Country Germany
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (16)
GSM5239426 M1_1-25_1
GSM5239427 M1_1-26_1
GSM5239428 M1_1-27_1
Relations
BioProject PRJNA721629
SRA SRP314652

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171989_M1_vs_M1_PLT.xlsx 38.6 Kb (ftp)(http) XLSX
GSE171989_M2_vs_M2_PLT.xlsx 322.3 Kb (ftp)(http) XLSX
GSE171989_Salmon_counts.tsv.gz 1.7 Mb (ftp)(http) TSV
GSE171989_Tregs_vs_PLTs.xlsx 2.8 Mb (ftp)(http) XLSX
GSE171989_Tregs_vs_PLTs_filtered.xlsx 273.8 Kb (ftp)(http) XLSX
GSE171989_Tregs_vs_Treg.PLT.xlsx 741.7 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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