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Series GSE193912 Query DataSets for GSE193912
Status Public on Jan 24, 2023
Title Not1 and Not4 inversely determine mRNA solubility that sets the dynamics of co-translational events
Organism Saccharomyces cerevisiae
Experiment type Other
Summary The goal is to compare role of Not1,4,5 in co-translational decay and solubility of RNAs from soluble and total RNA pools using degron strains
 
Overall design The cells are grown exponentially and total RNA is prepared by acid phenol extraction from cell pellets or from cell lysates prepared as for polysome profiling
 
Contributor(s) Allen G, Weiss B, Huch S, Pelechano V, Collart MA
Citation(s) 36803582
Submission date Jan 18, 2022
Last update date Mar 10, 2023
Contact name George Allen
Organization name University of Geneva
Street address Rue Michel-Servet 1
City Geneve
State/province Geneve
ZIP/Postal code 1206
Country Switzerland
 
Platforms (1)
GPL19756 Illumina NextSeq 500 (Saccharomyces cerevisiae)
Samples (48)
GSM5823489 frg_Not1p_AI_sol01_SC_SP_GACTAG
GSM5823490 frg_Not1p_AI_sol02_SC_SP_ACGCTG
GSM5823491 frg_Not1p_AI_sol03_SC_SP_GTGATC
Relations
BioProject PRJNA798390

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193912_RAW.tar 100.9 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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