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Series GSE196133 Query DataSets for GSE196133
Status Public on May 04, 2022
Title BRB-seq analysis of PFOS-induced thyroid hormone system disrupted rats reveal organ-specific effects
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Perfluorooctanesulfonic acid (PFOS) is a persistent anthropogenic chemical that can affect the thyroid hormone system in humans. In experimental animals, PFOS exposure decreases thyroxine (T4) and triiodothyronine (T3) levels, without a compensatory upregulation of thyroid stimulating hormone (TSH). In adults, THs are regulated by the hypothalamus-pituitary-thyroid (HPT) axis, but also organs such as the liver and potentially the gut microbiota. PFOS and other xenobiotics can therefore potentially disrupt the TH system through various entry points of disruption. To start addressing this issue, we performed a PFOS exposure study to identify effects in multiple organs and pathways simultaneously.
 
Overall design Hypothalamus, pituitary, thyroid, and liver transcriptional profiles of adult male rats exposed for 7 days to either vancomycin, PFOS or a combination vancomycin + PFOS (from PD56-62) were generated by BRB-sequencing.
 
Contributor(s) Chalmel F, Davidsen N, Kugathas I, Svingen T
Citation(s) 35460815
Submission date Feb 04, 2022
Last update date May 04, 2022
Contact name Frédéric Chalmel
E-mail(s) frederic.chalmel@inserm.fr
Organization name Inserm U1085-Irset
Department Physiology and physiopathology of the urogenital tract
Street address 9 avenue du Pr. Léon Bernard
City Rennes
State/province France
ZIP/Postal code 35000
Country France
 
Platforms (1)
GPL25947 Illumina NovaSeq 6000 (Rattus norvegicus)
Samples (192)
GSM5860801 Hypothalamus_Ctrl H1
GSM5860802 Hypothalamus_Ctrl H2
GSM5860803 Hypothalamus_Ctrl H3
Relations
BioProject PRJNA803446

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196133_Flurex_R20-29.unq.refseq.umi.1.dat.txt.gz 916.1 Kb (ftp)(http) TXT
GSE196133_Flurex_R20-29.unq.refseq.umi.2.dat.txt.gz 1.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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