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Series GSE213833 Query DataSets for GSE213833
Status Public on Jun 07, 2023
Title Gastric cancer cells treated with exosomes derived from Fusobacterium nucleatum infected MKN-28 cells [miRNA-seq]
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary To investigate the role of Fusobacterium nucleatum (Fn) in the development of gastric cancer, we extracted exosomes from the culture supernatant of MKN-28 cells treated with Fn or PBS, co-cultured them with AGS cells, and analyzed their miRNA-seq data for gene expression profiling.
 
Overall design Comparative gene expression profiling analysis of miRNA-seq data for AGS cells treated with Fn49256-GCEx or GCEx.
 
Contributor(s) Xin Y, Zhang X, Gui X, Zhang Y
Citation(s) 36898846
Submission date Sep 20, 2022
Last update date Jun 07, 2023
Contact name Xin Zhang
E-mail(s) zhangxin_21@126.com
Organization name Qilu Hospital, Shandong University
Street address 107 Wenhua Xi Road
City Jinan
State/province Shandong
ZIP/Postal code 250012
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (6)
GSM6595027 AGS cells, 1 [miRNA-seq]
GSM6595028 AGS cells, 2 [miRNA-seq]
GSM6595029 AGS cells, 3 [miRNA-seq]
This SubSeries is part of SuperSeries:
GSE214818 Gastric cancer cells treated with exosomes derived from Fusobacterium nucleatum infected MKN-28 cells
Relations
BioProject PRJNA882510

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE213833_process_data_file.txt.gz 24.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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