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| Status |
Public on Nov 21, 2023 |
| Title |
Single cell-resolved study of advanced murine MASH reveals a homeostatic pericyte signaling module |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
37972658 |
| Submission date |
Nov 18, 2022 |
| Last update date |
Nov 22, 2023 |
| Contact name |
Kim Ravnskjaer |
| E-mail(s) |
ravnskjaer@bmb.sdu.dk
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| Organization name |
University of Southern Denmark
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| Department |
Biochemistry and Molecular Biology
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| Lab |
Ravnskjaer lab
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| Street address |
Campusvej 55
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| City |
Odense M |
| ZIP/Postal code |
5230 |
| Country |
Denmark |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (38)
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| GSM6738758 |
Hepatic stellate cells, Ctrl, 3h, rep A |
| GSM6738759 |
Hepatic stellate cells, Ctrl, 3h, rep B |
| GSM6738760 |
Hepatic stellate cells, Ctrl, 3h, rep C |
| GSM6738761 |
Hepatic stellate cells, OCA, 6h, rep A |
| GSM6738762 |
Hepatic stellate cells, OCA, 6h, rep B |
| GSM6738763 |
Hepatic stellate cells, OCA, 6h, rep C |
| GSM6738764 |
Hepatic stellate cells, Ctrl, 6h, rep A |
| GSM6738765 |
Hepatic stellate cells, Ctrl, 6h, rep B |
| GSM6738766 |
Hepatic stellate cells, Ctrl, 6h, rep C |
| GSM6738767 |
Hepatic stellate cells, DMSO+VIP, 3h, rep A |
| GSM6738768 |
Hepatic stellate cells, DMSO+VIP, 3h, rep B |
| GSM6738769 |
Hepatic stellate cells, DMSO+VIP, 3h, rep C |
| GSM6738770 |
Hepatic stellate cells, OCA+VIP, 3h, rep A |
| GSM6738771 |
Hepatic stellate cells, OCA+VIP, 3h, rep B |
| GSM6738772 |
Hepatic stellate cells, OCA+VIP, 3h, rep C |
| GSM6738773 |
mCherry+ cells, Control, rep A |
| GSM6738774 |
mCherry+ cells, Control, rep B |
| GSM6738775 |
Hepatic stellate cells, Fsk, 24h, rep A |
| GSM6738776 |
Hepatic stellate cells, Fsk, 24h, rep B |
| GSM6738777 |
Hepatic stellate cells, Fsk, 24h, rep C |
| GSM6738778 |
Hepatic stellate cells, Ctrl, 24h, rep A |
| GSM6738779 |
Hepatic stellate cells, Ctrl, 24h, rep B |
| GSM6738780 |
Hepatic stellate cells, Ctrl, 24h, rep C |
| GSM6738781 |
NASH Liver cells, Western Diet 52w, rep A |
| GSM6738782 |
NASH Liver cells, Western Diet 52w, rep B |
| GSM6738783 |
NASH Liver cells, Western Diet 52w, rep C |
| GSM6738784 |
NASH Liver cells, Western Diet 52w, rep D |
| GSM6738785 |
NASH Liver cells, Western Diet 52w, rep E |
| GSM6738786 |
NASH Liver cells, Western Diet 52w, rep F |
| GSM6738787 |
Control Liver cells, Chow Diet 52w, rep A |
| GSM6738788 |
Control Liver cells, Chow Diet 52w, rep B |
| GSM6738789 |
Control Liver cells, Chow Diet 52w, rep C |
| GSM6738790 |
Control Liver cells, Chow Diet 52w, rep D |
| GSM6738791 |
Control Liver cells, Chow Diet 52w, rep E |
| GSM6738792 |
Control Liver cells, Chow Diet 52w, rep F |
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| This SuperSeries is composed of the following SubSeries:
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| GSE218294 |
Single cell-resolved study of advanced murine NASH reveals a homeostatic stellate cell signaling module [HSCc_fsk_3h_bulkRNA] |
| GSE218295 |
Single cell-resolved study of advanced murine MASH reveals a homeostatic pericyte signaling module |
| GSE218296 |
Single cell-resolved study of advanced murine MASH reveals a homeostatic pericyte signaling module |
| GSE218297 |
Single cell-resolved study of advanced murine MASH reveals a homeostatic pericyte signaling module |
| GSE218298 |
Single cell-resolved study of advanced murine MASH reveals a homeostatic pericyte signaling module |
| GSE218299 |
Single cell-resolved study of advanced murine MASH reveals a homeostatic pericyte signaling module |
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| Relations |
| BioProject |
PRJNA903115 |
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