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Series GSE22432 Query DataSets for GSE22432
Status Public on Oct 04, 2010
Title TGF-β1 Accelerates Dendritic Cell Differentiation from Common Dendritic Cell Progenitors (CDPs) and Directs Subset Specification Towards Conventional Dendritic Cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Dendritic cells (DCs) in lymphoid tissue comprise conventional DCs (cDCs) and plasmacytoid DCs (pDCs) that develop from common DC progenitors (CDPs). CDPs are Flt3+c-kitintM-CSFR+ and reside in bone marrow. Here we describe a two-step culture system that recapitulates DC development from c-kithiFlt3-/lo multipotent progenitors (MPPs) into CDPs and further into cDC and pDC subsets. MPPs and CDPs are amplified in vitro with Flt3 ligand, stem cell factor, hyper-IL-6 and insulin- like growth factor-1. The four-factor cocktail readily induces self-renewal of MPPs and their progression into CDPs and has no self-renewal activity on CDPs. The amplified CDPs respond to all known DC poietins and generate all lymphoid tissue DCs in vivo and in vitro. Additionally, in vitro CDPs recapitulate the cell surface marker and gene expression profile of in vivo CDPs and possess a DC-primed transcription profile. Transforming growth factor-β1 (TGF-β1) impacts on CDPs and directs their differentiation towards cDCs. Genome-wide gene expression profiling of TGF-β1-induced genes identified transcription factors, such as interferon regulatory factor-4 (IRF-4) and RelB, that are implicated as instructive factors for cDC subset specification. TGF-β1 also induced the transcription factor inhibitor of differentiation/DNA binding 2 (Id2) that suppresses pDC development. Thus, TGF-β1 directs CDP differentiation into cDC by inducing both cDC instructive factors and pDC inhibitory factors.
 
Overall design 20 samples in total.

Multipotent progenitor
- MPP_1
- MPP_2
Common dendritic cell progenitor
- CDP_1
- CDP_2
Plasmacytoid dendritic cell
- pDC_1
- pDC_2
Conventional dendritic cell
- cDC_1
- cDC_2
In vivo common dendritic cell progenitor
- In vivo CDP_1
- In vivo CDP_2

Untreated common dendritic cell progenitor (CDP)
- CDP_0h_1
- CDP_0h_2
TGF-beta1 treated (4 hours) CDP
- CDP_4h_1
- CDP_4h_2
TGF-beta1 treated (8 hours) CDP
- CDP_8h_1
- CDP_8h_2
TGF-beta1 treated (12 hours) CDP
- CDP_12h_1
- CDP_12h_2
TGF-beta1 treated (24 hours) CDP
- CDP_24h_1
- CDP_24h_2
 
Contributor(s) Felker P, Sere K, Lin Q, Becker C, Hristov M, Hieronymus T, Zenke M
Citation(s) 20881193
Submission date Jun 18, 2010
Last update date Feb 11, 2019
Contact name Martin Zenke
E-mail(s) Martin.Zenke@rwth-aachen.de
Phone +49-241-80 80760
Organization name Institute for Biomedical Engineering
Department Cell Biology
Street address Universitatsklinikum Aachen, RWTH
City Aachen
State/province NRW
ZIP/Postal code 52074
Country Germany
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (20)
GSM461424 Multipotent progenitor sample 1 (MPP_1)
GSM461426 Multipotent progenitor sample 2 (MPP_2)
GSM461428 Common dendritic cell progenitor sample 1 (CDP_1)
Relations
BioProject PRJNA128559

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22432_RAW.tar 70.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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