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Series GSE227788 Query DataSets for GSE227788
Status Public on Mar 28, 2023
Title Expression and correlation of circulating miRNAs in healthy obese children
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary The miRNA expression profile in the body circulation of obese children differs from normal children.Thirty-six differential expression miRNAs were screened by gene chip, and seven up-regulated miRNAs were verified by TaqMan qPCR This result is attributed to the abnormal metabolism of obese children. hsa-miR-15b-5p and hsa-miR-223-3p could serve as a molecular marker for screening obese children and susceptible population of metabolic syndrome.
 
Overall design Thirty children including 15 obese and 15 extremely thin were selected. The miRNA microarray was used to detect the expression of miRNAs in circulating plasma. The reliability of differential miRNA expression was verified using TaqMan qPCR. The correlation between miRNA and obesity was analyzed using multiple linear regression. Target genes for selected miRNAs were analyzed using informatics tools, and a functional network map was constructed.
 
Contributor(s) Ma F, Wu J
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Submission date Mar 20, 2023
Last update date Mar 31, 2023
Contact name Feifei Ma
E-mail(s) tiandou@sohu.com
Organization name Capital Institue of Pediatrics
Street address Road 2 Yabao
City Beijing
ZIP/Postal code 100020
Country China
 
Platforms (1)
GPL23365 Agilent-046064 Human miRNA Microarray, Release 19.0, 8x60K (miRNA_ID version)
Samples (30)
GSM7108159 JW0035
GSM7108160 JW0132
GSM7108161 JW0212
Relations
BioProject PRJNA946898

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227788_RAW.tar 206.0 Mb (http)(custom) TAR (of TXT)
GSE227788_expression.txt.gz 84.5 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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