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Series GSE228547 Query DataSets for GSE228547
Status Public on Oct 24, 2023
Title Eye lens organoids going simple: characterization of a new model
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To characterized a new model for lens development, a 3’ end RNA-seq was perform on the cell in 2D culture, on the all organoids (3D) and on the external and internal part of the organoids obtain with laser microdissection follow by RNA-extraction
 
Overall design Differential Gene Expression analysis of RNA-seq data from cell (21EM15) on 2D culture, on the all organoids (3D) and on the external and internal part of the organoids was performed
Web link https://0-doi-org.brum.beds.ac.uk/10.3390/cells12202478
 
Contributor(s) Duot M, Reboutier D, Viet J, Gautier-Courteille C
Citation(s) 37887322
Submission date Mar 30, 2023
Last update date Nov 14, 2023
Contact name Luc Paillard
E-mail(s) luc.paillard@univ-rennes.fr
Organization name Univ Rennes
Department IGDR (UMR6290)
Lab EGD team
Street address 2 Ave Leon Bernard
City Rennes
State/province Brittany
ZIP/Postal code 35000
Country France
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (15)
GSM7123810 WT_2D_1
GSM7123811 WT_2D_2
GSM7123812 WT_2D_3
Relations
BioProject PRJNA950327

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228547_DEA_tab_Microdissection_3D_WT_Internal_vs_External.csv.gz 1.5 Mb (ftp)(http) CSV
GSE228547_DEA_tab_WT_2D_vs_3D.csv.gz 1.7 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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