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Series GSE234372 Query DataSets for GSE234372
Status Public on Sep 07, 2023
Title BRAFV600E expression in intestinal tissue promotes a cholesterol metabolic gene signature that sustains hyperplasia and characterizes serrated colorectal neoplasia
Organism Mus musculus
Experiment type Expression profiling by array
Summary BRAF mutations occur early in serrated colorectal cancers, but their long-term influence on tissue homeostasis are poorly characterized. We investigated the impact of short-term (3 days) and long-term (6 months) expression of BrafV600E in the intestinal tissue of an inducible mouse model. We show that BrafV600E perturbs the homeostasis of intestinal epithelial cells, with impaired differentiation of enterocytes emerging after prolonged expression of the oncogene. Moreover, BrafV600E leads to a persistent transcriptional reprogramming with enrichment of numerous gene signatures indicative of proliferation and tumorigenesis, and signatures suggestive of metabolic rewiring. We focused on the top-ranking cholesterol biosynthesis signature and confirmed its increased expression in human serrated lesions. Functionally, the cholesterol lowering drug atorvastatin prevents the establishment of intestinal crypt hyperplasia in BrafV600E-mutant mice. Overall, our work unveils the long-term impact of BrafV600E expression in intestinal tissue and suggests that colorectal cancers with mutations in BRAF might be prevented by statins.
 
Overall design 20 samples
 
Contributor(s) Rufini A, Farahmand P, Pritchard C, Rzasa P, Sylvius N
Citation(s) 37735514
Submission date Jun 07, 2023
Last update date Sep 27, 2023
Contact name Nicolas Sylvius
E-mail(s) ns249@le.ac.uk
Organization name University of Leicester
Department CBS-Genetics
Lab Genomic Facility
Street address University Road
City Leicester
ZIP/Postal code LE1 1ST
Country United Kingdom
 
Platforms (1)
GPL21810 Agilent-074809 SurePrint G3 Mouse GE v2 8x60K Microarray [Feature Number version]
Samples (20)
GSM7466335 VCB 5120 (5)
GSM7466336 VCB 5474 (5)
GSM7466337 VCB 5475 (5)
Relations
BioProject PRJNA981142

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234372_RAW.tar 252.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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