|
| Status |
Public on Dec 12, 2023 |
| Title |
The genomes and epigenomes of aquatic plants (Lemnaceae) promote triploid hybridization and clonal reproduction |
| Organisms |
Lemna gibba; Lemna minor; Spirodela polyrhiza; Lemna japonica; Lemna turionifera; Wolffia australiana |
| Experiment type |
Methylation profiling by high throughput sequencing
Other
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| Web link |
https://www.lemna.org
|
| |
|
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jul 24, 2023 |
| Last update date |
Dec 13, 2023 |
| Contact name |
Robert A Martienssen |
| E-mail(s) |
martiens@cshl.edu
|
| Organization name |
Cold Spring Harbor Laboratory
|
| Department |
Delbruck Bldg.
|
| Lab |
Martienssen
|
| Street address |
1 Bungtown Rd
|
| City |
Cold Spring Harbor |
| State/province |
NY |
| ZIP/Postal code |
11724 |
| Country |
USA |
| |
|
| Platforms (20)
|
| GPL26319 |
Illumina NextSeq 500 (Spirodela polyrhiza) |
| GPL28797 |
Illumina HiSeq 2500 (Lemna gibba) |
| GPL33527 |
Illumina HiSeq 2500 (Spirodela polyrhiza) |
| GPL33605 |
Illumina NextSeq 500 (Lemna gibba) |
| GPL33606 |
Illumina NextSeq 500 (Lemna japonica) |
| GPL33607 |
Illumina HiSeq 2500 (Wolffia australiana) |
| GPL33608 |
Illumina NextSeq 500 (Lemna minor) |
| GPL33609 |
NextSeq 2000 (Lemna turionifera) |
| GPL33610 |
Illumina NextSeq 500 (Wolffia australiana) |
| GPL33611 |
MinION (Lemna gibba) |
| GPL33612 |
PromethION (Lemna japonica) |
| GPL33613 |
MinION (Lemna japonica) |
| GPL33614 |
PromethION (Lemna minor) |
| GPL33615 |
PromethION (Lemna turionifera) |
| GPL33616 |
MinION (Wolffia australiana) |
| GPL33617 |
Illumina MiSeq (Lemna gibba) |
| GPL33618 |
Illumina NovaSeq 6000 (Lemna japonica) |
| GPL33619 |
Illumina MiSeq (Lemna japonica) |
| GPL33620 |
Illumina NovaSeq 6000 (Lemna minor) |
| GPL33621 |
Illumina NovaSeq 6000 (Lemna turionifera) |
|
| Samples (42)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE238131 |
The genomes and epigenomes of aquatic plants (Lemnaceae) promote triploid hybridization and clonal reproduction [WGBS] |
| GSE238132 |
The genomes and epigenomes of aquatic plants (Lemnaceae) promote triploid hybridization and clonal reproduction [Hi-C] |
| GSE238133 |
The genomes and epigenomes of aquatic plants (Lemnaceae) promote triploid hybridization and clonal reproduction [RNA-Seq] |
| GSE238134 |
The genomes and epigenomes of aquatic plants (Lemnaceae) promote triploid hybridization and clonal reproduction [smallRNA-Seq] |
| GSE238135 |
The genomes and epigenomes of aquatic plants (Lemnaceae) promote triploid hybridization and clonal reproduction [WGS] |
|
| Relations |
| BioProject |
PRJNA998009 |
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