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| Status |
Public on May 01, 2024 |
| Title |
Erythromycin mediates co-flocculation between cyanobacterium Synechocystis sp. PCC 6803 and filamentous fungi in liquid cultivation without organic compounds. |
| Organism |
Synechocystis sp. PCC 6803 |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Transcriptomic analysis of suspended and flocculated (with the fungi) Synechocystis cells suggested that the EM-mediated co-flocculation was a result of down-regulation of the minor pilin genes and up-regulation of several genes including the chaperone gene for pilin regulation, the S-layer protein genes, the exopolysaccharide-polymerization gene, and the genes for signaling proteins involved in cell attachment and abiotic-stress responses. The EM treatment may be applied in the co-culture between other cyanobacteria and fungi to mediate cell bio-flocculation.
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| Overall design |
Transcriptomic analysis bewteen suspended and flocculated (with the fungi) Synechocystis cells
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| Contributor(s) |
Monshupanee T, Leksingto J |
| Citation(s) |
38671026 |
| BioProject |
PRJNA979983 |
| Submission date |
Sep 27, 2023 |
| Last update date |
May 02, 2024 |
| Contact name |
Jidapa Leksingto |
| E-mail(s) |
jidapa253957@gmail.com
|
| Phone |
0972405377
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| Organization name |
Chulalongkorn
|
| Street address |
254
|
| City |
Bangkok |
| ZIP/Postal code |
10330 |
| Country |
Thailand |
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| Platforms (1) |
| GPL28944 |
Illumina HiSeq 4000 (Synechocystis sp. PCC 6803) |
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| Samples (6)
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