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Series GSE257067 Query DataSets for GSE257067
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR043YAI)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against UNC-62 in D4 worms.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR043YAI/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (2)
GSM8107044 TF ChIP-seq from whole organism (ENCLB297TVF)
GSM8107045 TF ChIP-seq from whole organism (ENCLB484TCF)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE257067_ENCFF017FUN_optimal_IDR_thresholded_peaks_ce11.bed.gz 1.9 Kb (ftp)(http) BED
GSE257067_ENCFF053CYP_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257067_ENCFF345LQW_signal_of_unique_reads_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257067_ENCFF398IME_optimal_IDR_thresholded_peaks_ce11.bigBed 48.7 Kb (ftp)(http) BIGBED
GSE257067_ENCFF624OUP_read-depth_normalized_signal_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257067_ENCFF677ZSM_optimal_IDR_thresholded_peaks_ce10.bed.gz 2.0 Kb (ftp)(http) BED
GSE257067_ENCFF697NPA_signal_of_unique_reads_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257067_ENCFF699CZR_peaks_and_background_as_input_for_IDR_ce11.bigBed 146.8 Kb (ftp)(http) BIGBED
GSE257067_ENCFF702NWZ_peaks_and_background_as_input_for_IDR_ce11.bed.gz 55.5 Kb (ftp)(http) BED
GSE257067_ENCFF782SZY_read-depth_normalized_signal_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257067_ENCFF783LHA_peaks_and_background_as_input_for_IDR_ce10.bed.gz 53.3 Kb (ftp)(http) BED
GSE257067_ENCFF809TPJ_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257067_ENCFF990UMR_optimal_IDR_thresholded_peaks_ce10.bigBed 42.3 Kb (ftp)(http) BIGBED
GSE257067_RAW.tar 123.8 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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