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Series GSE258991 Query DataSets for GSE258991
Status Public on Feb 28, 2024
Title Newly developed preclinical models reveal broad spectrum CDK inhibitors as potent drugs for CRPC exhibiting primary resistance to enzalutamide
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Androgen-deprivation therapy is a standard treatment for advanced prostate cancer. However, most patients eventually acquire resistance and progress to castration-resistant prostate cancer (CRPC). In this study, we established new CRPC cell lines, AILNCaP14 and AILNCaP15, from LNCaP cells under androgen-deprived conditions. Unlike most pre-existing CRPC cell lines, both cell lines expressed higher levels of androgen receptor (AR) and prostate-specific antigen (PSA) than parental LNCaP cells. Moreover, these cells exhibited primary resistance to enzalutamide. Since AR signaling plays a significant role in the development of CRPC, PSA promoter sequences fused with GFP were introduced into AILNCaP14 cells to conduct GFP fluorescence-based chemical screening. We identified flavopiridol, a broad spectrum CDK inhibitor, as a candidate drug that could repress AR transactivation of CRPC cells, presumably through the inhibition of phosphorylation of AR on the serine 81 residue (pARSer81). Importantly, this broad spectrum CDK inhibitor inhibited the proliferation of AILNCaP14 cells both in vitro and in vivo. Moreover, a newly developed liver metastatic model using AILNCaP15 cells revealed that the compound attenuated tumor growth of CRPC harboring highly metastatic properties. Finally, we developed a patient-derived xenograft (PDX) model of CRPC and DCaP CR from a patient presenting therapeutic resistance to enzalutamide, abiraterone, and docetaxel. Flavopiridol successfully suppressed the tumor growth of CRPC in this PDX model. Since ARSer81 was found to be phosphorylated in clinical CRPC samples, our data suggested that broad spectrum CDK inhibitors, might be a potent candidate drug for the treatment of CRPC, including those exhibiting primary resistance to enzalutamide.
 
Overall design To investigate whether AILNCaP14 cells exhibit genes differentially regulated by AR compared to LNCaP cells, CAGE sequencing was used to analyze the differentially expressed genes (DEGs) between AILNCaP14 and LNCaP cells, with each experiment conducted in triplicate.
 
Contributor(s) Matsuoka T, Sugiyama A, Sumiyoshi T, Mizuno K
Citation(s) 37923364
Submission date Feb 25, 2024
Last update date Feb 28, 2024
Contact name Eijiro Nakamura
E-mail(s) hap@kuhp.kyoto-u.ac.jp
Organization name National Cancer Center Japan
Department Urology
Street address Tukiji 5-1-1
City Tokyo
State/province Not in USA
ZIP/Postal code 104-0045
Country Japan
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (24)
GSM8110856 LNCaP cells, #1
GSM8110857 LNCaP cells, #2
GSM8110858 LNCaP cells, #3
Relations
BioProject PRJNA1080282

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Supplementary file Size Download File type/resource
GSE258991_LNCaP_AILNCaP14_AR_siRNA_data.xlsx 2.2 Mb (ftp)(http) XLSX
GSE258991_LNCaP_AILNCaP14_data.xlsx 837.0 Kb (ftp)(http) XLSX
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Raw data are available in SRA

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