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| Status |
Public on May 09, 2012 |
| Title |
FOSL1 as a candidate target gene for 11q12 rearrangements in desmoplastic fibroblastoma |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Third-party reanalysis
|
| Summary |
Global gene expression analysis of desmoplastic fibroblastoma (DF) and histologically similar tumors. FOSL1 is identified as a candidate target gene for the 11q12 rearrangments in DF.
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| Overall design |
RNA was extracted from 3 frozen desmoplastic fibroblastoma (DF) biopsies and hybridized onto Affymetrix Human Gene 1.0 ST arrays. RNA from 6 myxofibrosarcoma (MFS), 6 desmoid fibromatosis (DFM), 5 solitary fibrous tumor (SFT) and 17 low-grade fibromyxoid sarcomas (LGFMS) were used as controls.
The control dataset has been previously published and is available in the GEO database under Series accession GSE24369.
The complete dataset representing: (1) the 3 desmoplastic fibroblastoma Samples and (2) the 34 control Samples from Series GSE24369 (re-processed using RMA), is linked below as a supplementary file.
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| Contributor(s) |
Macchia G, Trombetta D, Möller E, Mertens F, Storlazzi CT, Debiec-Rychter M, Sciot R, Nord KH |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jan 17, 2012 |
| Last update date |
Jul 26, 2018 |
| Contact name |
Karolin H Nord |
| Organization name |
Lund University
|
| Department |
Dept of Clinical Genetics
|
| Street address |
BMC C13
|
| City |
Lund |
| ZIP/Postal code |
SE-22184 |
| Country |
Sweden |
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| Platforms (1) |
| GPL6244 |
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] |
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| Samples (3) |
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| Relations |
| Reanalysis of |
GSM600928 |
| Reanalysis of |
GSM600929 |
| Reanalysis of |
GSM600930 |
| Reanalysis of |
GSM600931 |
| Reanalysis of |
GSM600932 |
| Reanalysis of |
GSM600933 |
| Reanalysis of |
GSM600940 |
| Reanalysis of |
GSM600941 |
| Reanalysis of |
GSM600942 |
| Reanalysis of |
GSM600943 |
| Reanalysis of |
GSM600944 |
| Reanalysis of |
GSM600945 |
| Reanalysis of |
GSM600946 |
| Reanalysis of |
GSM600947 |
| Reanalysis of |
GSM600948 |
| Reanalysis of |
GSM600949 |
| Reanalysis of |
GSM600950 |
| Reanalysis of |
GSM600951 |
| Reanalysis of |
GSM600952 |
| Reanalysis of |
GSM600953 |
| Reanalysis of |
GSM600954 |
| Reanalysis of |
GSM600955 |
| Reanalysis of |
GSM600956 |
| Reanalysis of |
GSM600957 |
| Reanalysis of |
GSM600958 |
| Reanalysis of |
GSM600959 |
| Reanalysis of |
GSM600960 |
| Reanalysis of |
GSM600961 |
| Reanalysis of |
GSM600962 |
| Reanalysis of |
GSM600963 |
| Reanalysis of |
GSM600964 |
| Reanalysis of |
GSM600965 |
| Reanalysis of |
GSM600966 |
| Reanalysis of |
GSM600967 |
| BioProject |
PRJNA150791 |
