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Series GSE47171 Query DataSets for GSE47171
Status Public on Mar 21, 2014
Title Expression analysis of Pseudozyma antarctica T-34 and Ustilago maydis on different carbon source
Organisms Ustilago maydis 521; Moesziomyces antarcticus T-34
Experiment type Expression profiling by array
Summary Investigation of whole genome gene expression level in Pseudozyma antarctica T-34, compared to Ustilago maydis UM521.
To clarify the transcriptomic characteristics of Pseudozyma antarctica under the conditions of high MEL production, a DNA microarray of both the strains, Pseudozyma antarctica T-34 and Ustilago maydis UM521 was prepared and analyzed the transcriptomes.
 
Overall design A DNA chip study using mRNA from the cultures of Pseudozyma antarctica T-34 and Ustilago maydis UM521 demonstrated the gene expression level of each strain.
 
Contributor(s) Morita T, Koike H
Citation(s) 24586250, 31923270
Submission date May 22, 2013
Last update date Jan 27, 2020
Contact name Hideaki Koike
E-mail(s) hi-koike@aist.go.jp
Phone +81-29-861-6679
Organization name National Institute of Advanced Industrial Science and Technology
Street address Higashi 1-1-1
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-0025
Country Japan
 
Platforms (1)
GPL17185 Microarray for gene expression of Pseudozyma antarctica T-34 and Ustilago maydis UM521 [100617_RDKK270_PantUmay_expr]
Samples (2)
GSM1146005 Pseudozyma_glucose_oil
GSM1146006 Umaydis_glucose_oil
Relations
BioProject PRJNA204972

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47171_100617_RDKK270_PantUmay_expr_X4.ncd.gz 262 b (ftp)(http) NCD
GSE47171_RAW.tar 13.3 Mb (http)(custom) TAR (of PAIR)
Processed data included within Sample table

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