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Series GSE62623 Query DataSets for GSE62623
Status Public on May 14, 2015
Title Gene expression in mouse blood following low dose-rate or acute x-ray exposure
Organism Mus musculus
Experiment type Expression profiling by array
Summary Radiation biodosimetry can play a critical role in the response to a large-scale radiologic emergency, and gene expression profiles have shown promise for providing biodosimetric information. This study was designed to test if gene expression could be used to distinguish between doses received from acute exposures and more protracted exposures, such as those that would result from fallout. Mice were exposed to whole body X-rays at low dose rate (LDR, 3.09 mGy/min) for 6, 12, or 24 hours (1.1, 2.2, or 4.4 Gy), or to equivalent doses delivered at high dose rate (HDR, 1.03 Gy/min). Global gene expression was measured in their blood 24 h after the start of exposure, and genes with the potential to classify samples by radiation dose and dose rate were identified.
 
Overall design Data consist of 48 samples, representing 6 independent samples each from 3 doses delivered as either acute or low dose rate x-rays, plus 12 controls representing both acute and low dose rate sham treatments.
 
Contributor(s) Paul S, Amundson SA
Citation(s) 26114327
Submission date Oct 22, 2014
Last update date Jan 19, 2018
Contact name Sally Amundson
E-mail(s) saa2108@cumc.columbia.edu
Organization name Columbia University
Department Center for Radiological Research
Street address 630 W. 168th St
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (1)
GPL10333 Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Feature Number version)
Samples (48)
GSM1530171 Low-dose-rate_2Gy_rep4
GSM1530172 Low-dose-rate_2Gy_rep5
GSM1530173 Unirradiated control_0Gy_rep4
Relations
BioProject PRJNA264562

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62623_RAW.tar 434.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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