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Series GSE65250 Query DataSets for GSE65250
Status Public on Aug 31, 2017
Title Tissue overgrowth induced by coexpression of the progenitor genes hth/MEIS1 and tsh/TSHZ results from an imbalance in the estrogen response pathway in Drosophila [FAIRE-Seq]
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Analysis of third instar eye-antennal Drosophila imaginal discs with forced expression of hth, tsh or hth+tsh in the eye using an eye-specific GAL4 driver (optix2.3-GAL4). Forced maintenance of hth+tsh expression (but not of any of the two alone) results in overgrowth and aberrant cell differentiation. Results provide insight into new targets of hth+tsh.
 
Overall design RNA-seq gene expression profiling across Drosophila 3rd instar larval wild type eye-antennal discs and genetic perturbations of tsh, hth and tsh-hth together.
 
Contributor(s) Neto M, Naval Sánchez M, Potier D, Pereira PS, Geerts D, Aerts S, Casares F
Citation(s) 28687780
Submission date Jan 23, 2015
Last update date May 15, 2019
Contact name Delphine Potier
E-mail(s) potier@ciml.univ-mrs.fr
Organization name CIML
Street address 163 avenue de luminy
City Marseille
ZIP/Postal code 13009
Country France
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (3)
GSM1590761 HTH_TSH_FAIREseq
GSM1590762 TSH_FAIREseq
GSM1590763 HTH_FAIREseq
This SubSeries is part of SuperSeries:
GSE65252 Tissue overgrowth induced by coexpression of the progenitor genes hth/MEIS1 and tsh/TSHZ results from an imbalance in the estrogen response pathway in Drosophila
Relations
BioProject PRJNA273499
SRA SRP052791

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65250_RAW.tar 350.0 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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