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| Status |
Public on Feb 22, 2018 |
| Title |
Genome-wide small RNAtranscriptome analysis during dehydration and recovery in gametophores of Physcomitrella patens |
| Organism |
Physcomitrium patens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
Small RNA transcript abundances were analyzed with samples taken from hydrated (HD), moderate dehydration (MDH), desiccated (SDH), partially recovered (PRE) and fully recovered (FRE) gametophores of P. patens by using next generation sequencing. Totally, 147 microRNAs were identified as differentially expressed miRNAs.The results provided insight for exploring the mechanisms of desiccation tolerance and their evolution.
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| Overall design |
Examination of miRNA transcript abundances in hydrated (HD), moderate dehydration (MDH), desiccated (SDH), partially recovered (PRE) and fully recovered (FRE) gametophores, for each treatment, two biological replicates were included.
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| Contributor(s) |
Xiao L |
| Citation missing |
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| Submission date |
Mar 05, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Lihong Xiao |
| E-mail(s) |
xiaolihong6290@gmail.com
|
| Organization name |
Capital Normal University
|
| Street address |
No.105 North Road of West 3rd-ring Road.Haidian District
|
| City |
Beijing |
| ZIP/Postal code |
100048 |
| Country |
China |
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| Platforms (1) |
| GPL14798 |
Illumina HiSeq 2000 (Physcomitrella patens) |
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| Samples (10)
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| Relations |
| BioProject |
PRJNA277372 |
| SRA |
SRP055886 |
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