NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE71264 Query DataSets for GSE71264
Status Public on Jul 22, 2016
Title CELF2 CLIP-seq in human JSL1 T cells
Organism Homo sapiens
Experiment type Other
Summary In this study, CLIP-seq was used to identify sites of CELF2-mRNA interactions in JSL1 T cells.
 
Overall design (SRA study SRP059226, BioProject accession PRJNA285907)
 
Contributor(s) Lynch KW, Cole BS
Citation(s) 27096301
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 GM103383 Mechanisms and consequences of CELF2 regulation in T cell development UNIVERSITY OF PENNSYLVANIA KRISTEN W LYNCH
R35 GM118048 Molecular Mechanisms and Signal-Induced Regulation of Alternative Splicing UNIVERSITY OF PENNSYLVANIA KRISTEN W LYNCH
BioProject PRJNA285907
Submission date Jul 23, 2015
Last update date May 15, 2019
Contact name Kristen Lynch
E-mail(s) klync@pennmedicine.upenn.edu
Organization name University of Pennsylvania
Department Biochemistry and Molecular Biophysics
Lab Kristen Lynch
Street address 906 Stellar Chance Labs 422 Curie Blvd
City Philadelphia
State/province Pennsylvania
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (18)
GSM1831617 CELF2_CLIPseq_unstimulated_1.1
GSM1831618 CELF2_CLIPseq_unstimulated_1.2
GSM1831619 CELF2_CLIPseq_unstimulated_1.3
Relations
SRA SRP059226

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71264_CELF2_CLIPseq_stimulated_JSL1_collapsed_alignments.bed.gz 51.9 Mb (ftp)(http) BED
GSE71264_CELF2_CLIPseq_stimulated_JSL1_peaks.bed.gz 564.8 Kb (ftp)(http) BED
GSE71264_CELF2_CLIPseq_unstimulated_JSL1_collapsed_alignments.bed.gz 65.9 Mb (ftp)(http) BED
GSE71264_CELF2_CLIPseq_unstimulated_JSL1_peaks.bed.gz 523.5 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap