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Series GSE77124 Query DataSets for GSE77124
Status Public on Aug 12, 2016
Title Comparative Methylome Analyses Reveal Human Brain Specific Methylated Regions Implicated in Transcription Regulation
Organism Macaca mulatta
Experiment type Methylation profiling by high throughput sequencing
Summary To gain further insights into human brain specific epigenetic changes, we generated whole genome bisulfite sequencing methylation maps (methylomes) of rhesus macaque brains. These were then compared to methylomes of human and chimpanzee brains that were previously generated. We then performed validation experiments using targeted bisulfite sequencing. 
 
Overall design Bisulfite-seq in prefrontal cortext of two male Macaca mulatta
 
Contributor(s) Mendizabal I, Yi SV
Citation(s) 27563052
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 MH103517 Human Specific Brain DNA Methylation and Neuropsychiatric Diseases GEORGIA TECH RESEARCH CORPORATION TODD M PREUSS, YI
Submission date Jan 22, 2016
Last update date May 15, 2019
Contact name Soojin V Yi
E-mail(s) soojinyi@gatech.edu
Organization name Georgia Institute of Technology
Department School of Biology
Street address 950 Atlantic Dr
City Atlanta
State/province GA
ZIP/Postal code 30318
Country USA
 
Platforms (1)
GPL14954 Illumina HiSeq 2000 (Macaca mulatta)
Samples (2)
GSM2044557 TFH91_WGBS
GSM2044558 TFH92_WGBS
Relations
BioProject PRJNA309502
SRA SRP068766

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77124_RAW.tar 698.0 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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