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Series GSE78892 Query DataSets for GSE78892
Status Public on Feb 23, 2017
Title The impact of hepatocyte specific Cyp51 disruption on development and sexual dimorphism in mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Unperturbed cholesterol homeostasis is important for normal development and sexual maturation in mice. Cyp51 is the rate limiting step in the post-lanosteorl part of cholesterol biosynthesis. Unlike the full body knockout, hepatocyte specific Cyp51 knockout mice survive throughout adulthood, however their livers are severly affected. Several of the hepatocyte specific Cyp51 knockout mice develop severe liver injury or die prior to reaching adulthood (from 4-10 weeks of age; designated as runts). We aim to uncover the timing and the mechanistic background governing the liver damage and sex differences.
Hepatocyte-specific Cyp51 knockout and wild type mice on a mixed background (129/Pas (10%) × C57BL/6J (90%)) of both sexes (F and M) were investigated at the pre pubertal (3 weeks), late pubertal (6 weeks) and adult (19 weeks) stage of development. This age span allows us to also observe the impact of sexual maturation on the disease development, as the liver is one of the most sexually dimorphic non-reproductive organs. Runt mice were evaluated to differentiate them from the other KO mice with milder conditions.
 
Overall design 3 factor experimental design: 3 ages (3, 6 and 19 weeks), 2 genotypes (WT, Cyp51 KO), 2 sexes (F, M); 2 biological replicates per condition, 24 mice altogether. Runt mice were also included in the experiment as a separate phenotype (5-7 weeks of age, F and M, Cyp51 KO); 3 biological replicates per sex. A total of 30 microarrays were used.
 
Contributor(s) Urlep Ž, Juvan P, Rozman D
Citation(s) 28098217
Submission date Mar 04, 2016
Last update date Feb 21, 2018
Contact name Peter Juvan
Phone +386 1 543 7595
Organization name Faculty of Medicine, University of Ljubljana
Department Institute of Biochemistry
Lab Center for Functional Genomics and Bio-Chips
Street address Zaloska 4
City Ljubljana
ZIP/Postal code SI-1000
Country Slovenia
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (30)
GSM2080571 3week_Male_Cyp51KO_1
GSM2080572 3week_Male_Cyp51KO_2
GSM2080573 3week_Female_Cyp51KO_1
Relations
BioProject PRJNA314318

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Supplementary file Size Download File type/resource
GSE78892_RAW.tar 265.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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